RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ACCSQ96QU6 501 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 SMARCAD1Q9H4L7 1026 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 PCIF1Q9H4Z3 704 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 TRPC6Q9Y210 931 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 ITIH6Q6UXX5 1313 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 GNA14O95837 355 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 HOXC6P09630 235 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 RPL13P26373 211 aaKnown RBP13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 NOGQ13253 232 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 LRRC71Q8N4P6 559 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 ZSWIM2Q8NEG5 633 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 PPTC7Q8NI37 304 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 FAM167AQ96KS9 214 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 ST6GALNAC4Q9H4F1 302 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 SUGCTQ9HAC7 445 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 USP20Q9Y2K6 914 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 RASSF10A6NK89 507 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 AKR1B15C9JRZ8 316 aaPredicted RBP13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 GLRA2P23416 452 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 RGS2P41220 211 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 PSMC4P43686 418 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 MARSP56192 900 aaKnown RBP13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 CAP1Q01518 475 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 TNFAIP2Q03169 654 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 FKBP15Q5T1M5 1219 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 RDH13Q8NBN7 331 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 OR6J1Q8NGC5 347 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 IFT74Q96LB3 600 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 PCMTD1Q96MG8 357 aaPredicted RBP13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 CBWD1Q9BRT8 395 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 NTPCRQ9BSD7 190 aaKnown RBP13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 TBX20Q9UMR3 447 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 KAT6AQ92794 2004 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 A0A1W2PQC6 194 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 ANKRD63C9JTQ0 380 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 MAFO75444 373 aaPredicted RBP13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 ZNF865P0CJ78 1059 aaPredicted RBP13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 ARL2P36404 184 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 RFC5P40937 340 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 IGBP1P78318 339 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 ALCAMQ13740 583 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 OLFML2BQ68BL8 750 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 IQSEC1Q6DN90 963 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 TAS1R3Q7RTX0 852 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 SPIRE2Q8WWL2 714 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 TMEM206Q9H813 350 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 C17orf75Q9HAS0 396 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 ARMCX3Q9UH62 379 aaPredicted RBP13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 GABRQQ9UN88 632 aa13.37□□□□□ -0.27
SPTBN1-203ENST00000389980 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.37□□□□□ -0.273e-10■■■■□ 20.2
SPTBN1-203ENST00000389980 CEP350Q5VT06 3117 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 TTC26A0AVF1 554 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 LRRIQ4A6NIV6 560 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 DYNC1LI2O43237 492 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 EPB41P11171 864 aaKnown RBP13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 RTP1P59025 263 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 HTRA3P83110 453 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 DCAF17Q5H9S7 520 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 FRMD5Q7Z6J6 570 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 TMEM139Q8IV31 216 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 MSL3Q8N5Y2 521 aaKnown RBP13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 ZNF784Q8NCA9 323 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 PPP1R13LQ8WUF5 828 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 EMID1Q96A84 441 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 ZNF668Q96K58 619 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 ERGIC2Q96RQ1 377 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 APBA2Q99767 749 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 C16orf70Q9BSU1 422 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 CRACR2AQ9BSW2 395 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 DMAC2Q9NW81 257 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 ERAP1Q9NZ08 941 aa13.36□□□□□ -0.27
SPTBN1-203ENST00000389980 EPHB6O15197 1021 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 EXOC3O60645 756 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 MFAP3LO75121 409 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 GJB1P08034 283 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 MMP3P08254 477 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 KCNH2Q12809 1159 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 TCERG1LQ5VWI1 586 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 MAP4K3Q8IVH8 894 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 FAM186BQ8IYM0 893 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 SOCS4Q8WXH5 440 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 TMX1Q9H3N1 280 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 FAM207AQ9NSI2 230 aaPredicted RBP13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 SPTLC3Q9NUV7 552 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 ARHGAP28Q9P2N2 729 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 SIK3Q9Y2K2 1263 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 GOLGA8IPA6NC78 632 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 GOLGA8JA6NMD2 632 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 SLC16A3O15427 465 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 HBP1O60381 514 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 INSRRP14616 1297 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 TRIM21P19474 475 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 ADSSP30520 456 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 PSMC2P35998 433 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 CHMP4BP1P59074 171 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms