RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 ICAM1P05362 532 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 SPATA31C1P0DKV0 1188 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 PON1P27169 355 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 HNRNPH3P31942 346 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 SPIRE1Q08AE8 756 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 PAK2Q13177 524 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 SYT2Q8N9I0 419 aaPredicted RBP13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 TSEN2Q8NCE0 465 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 MBOAT7Q96N66 472 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 ARP10275 920 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 PDCLQ13371 301 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 CEP85LQ5SZL2 805 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 MOB2Q70IA6 237 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 IL31RAQ8NI17 732 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 LPAR1Q92633 364 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 FAM153AQ9UHL3 310 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 TSKSQ9UJT2 592 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 IGLV3-22A0A075B6J6 115 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 K7ENM7 598 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 KRT13P13646 458 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 NAB2Q15742 525 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 IFI16Q16666 785 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 Q4G0T1 1027 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 RINT1Q6NUQ1 792 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 RNF217Q8TC41 542 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 FAM20AQ96MK3 541 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 CAPS2Q9BXY5 557 aa13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-202ENST00000389645 COPB2P35606 906 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 MMGT1Q8N4V1 131 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 CTNNBL1Q8WYA6 563 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 CCDC127Q96BQ5 260 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 SLC38A10Q9HBR0 1119 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 ZNF112Q9UJU3 913 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 ATAD5Q96QE3 1844 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 GRID2IPA4D2P6 1211 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 GOLGA8IPA6NC78 632 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 GOLGA8JA6NMD2 632 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 PLA2G6O60733 806 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 PSMC2P35998 433 aaKnown RBP13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 ZNF211Q13398 564 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 ZNF746Q6NUN9 644 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 ELMO3Q96BJ8 720 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 PPP1R9AQ9ULJ8 1098 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 IRF6O14896 467 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 RAD51CO43502 376 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 USP2O75604 605 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 PPFIA1Q13136 1202 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 OR2W6PQ8NHA6 318 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 EDEM3Q9BZQ6 932 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 METTL14Q9HCE5 456 aaKnown RBP13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 AMACRQ9UHK6 382 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 NAGPAQ9UK23 515 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 DNAJC12Q9UKB3 198 aa13.12□□□□□ -0.31
CAPRIN1-202ENST00000389645 EIF2AK2P19525 551 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 CIITAP33076 1130 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 NNTQ13423 1086 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 DRAP1Q14919 205 aaPredicted RBP13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 EDRF1Q3B7T1 1238 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 LRRC31Q6UY01 552 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 CCDC169A6NNP5 214 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 TISP43B9A030 160 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 PDXKO00764 312 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 NDUFAB1O14561 156 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 STXBP4Q6ZWJ1 553 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 FRMD5Q7Z6J6 570 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 UHMK1Q8TAS1 419 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 ZIM3Q96PE6 472 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 TAAR1Q96RJ0 339 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 OSGEPQ9NPF4 335 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 VAV3Q9UKW4 847 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 TLDC2A0PJX2 215 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 TMEM150BA6NC51 233 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 VWA5AO00534 786 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 EVI5O60447 810 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 EYA4O95677 639 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 MNAT1P51948 309 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 RPS6P62753 249 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 CEP55Q53EZ4 464 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 COBLL1Q53SF7 1204 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 MIER3Q7Z3K6 550 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 LXNQ9BS40 222 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 VIPAS39Q9H9C1 493 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 CTTNBP2NLQ9P2B4 639 aa13.11□□□□□ -0.31
CAPRIN1-202ENST00000389645 EBAG9O00559 213 aa13.1□□□□□ -0.31
CAPRIN1-202ENST00000389645 CYP3A4P08684 503 aa13.1□□□□□ -0.31
CAPRIN1-202ENST00000389645 ITGB5P18084 799 aa13.1□□□□□ -0.31
CAPRIN1-202ENST00000389645 GCLMP48507 274 aa13.1□□□□□ -0.31
CAPRIN1-202ENST00000389645 TRAF1Q13077 416 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms