RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 CASP5P51878 434 aa12.34□□□□□ -0.43
CCDC149-202ENST00000389609 GALCP54803 685 aa12.34□□□□□ -0.43
CCDC149-202ENST00000389609 IFFO1Q0D2I5 559 aa12.34□□□□□ -0.43
CCDC149-202ENST00000389609 KIF22Q14807 665 aa12.34□□□□□ -0.43
CCDC149-202ENST00000389609 RNF187Q5TA31 235 aaPredicted RBP12.34□□□□□ -0.43
CCDC149-202ENST00000389609 CEP57Q86XR8 500 aa12.34□□□□□ -0.43
CCDC149-202ENST00000389609 FAM186BQ8IYM0 893 aa12.34□□□□□ -0.43
CCDC149-202ENST00000389609 OLIG1Q8TAK6 271 aa12.34□□□□□ -0.43
CCDC149-202ENST00000389609 ZNF483Q8TF39 744 aaPredicted RBP12.34□□□□□ -0.43
CCDC149-202ENST00000389609 ZHX3Q9H4I2 956 aa12.34□□□□□ -0.43
CCDC149-202ENST00000389609 CCDC134Q9H6E4 229 aa12.34□□□□□ -0.43
CCDC149-202ENST00000389609 CCDC169A6NNP5 214 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 E7EVH7 732 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 C6orf229H3BNL8 230 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 PODXLO00592 558 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 DDX3YO15523 660 aaKnown RBP12.33□□□□□ -0.44
CCDC149-202ENST00000389609 EVI5O60447 810 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 MTA2O94776 668 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 MAPTP10636 758 aaKnown RBP12.33□□□□□ -0.44
CCDC149-202ENST00000389609 ACTN1P12814 892 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 SLC8A3P57103 927 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 SNRPFP62306 86 aaKnown RBP12.33□□□□□ -0.44
CCDC149-202ENST00000389609 PLS1Q14651 629 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 DUPD1Q68J44 220 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 CCDC121Q6ZUS5 278 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 TMEM179Q6ZVK1 233 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 HS2ST1Q7LGA3 356 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 FUKQ8N0W3 1084 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 NEK9Q8TD19 979 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 TATDN2Q93075 761 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 TEKT1Q969V4 418 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 RPS6KC1Q96S38 1066 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 PSMD1Q99460 953 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 IDI2Q9BXS1 227 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 CENPHQ9H3R5 247 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 UBR3Q6ZT12 1888 aa12.33□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L15C9J2P7 530 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L13C9JLJ4 530 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L11C9JVI0 530 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L18D6R9N7 530 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L22D6RA61 530 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L17D6RBQ6 530 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L19D6RCP7 530 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L20D6RJB6 530 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 RIMBP2O15034 1052 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 MAPK13O15264 365 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 TGFB1I1O43294 461 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 CHRNA3P32297 505 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 FMO5P49326 533 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L24Q0WX57 530 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 PABPC4Q13310 644 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 PPP2R5CQ13362 524 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 DCAF17Q5H9S7 520 aaPredicted RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 SLFN13Q68D06 897 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 TATDN1Q6P1N9 297 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 USP17L6PQ6QN14 398 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 FBXO11Q86XK2 927 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 ZDHHC15Q96MV8 337 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 UIMC1Q96RL1 719 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 ERP44Q9BS26 406 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 DDX47Q9H0S4 455 aaKnown RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 KDM4CQ9H3R0 1056 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 F8W031 263 aaPredicted RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 GCNT3O95395 438 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 GSTA1P08263 222 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 ICA1Q05084 483 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 IFT88Q13099 833 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 TRADDQ15628 312 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 PRR16Q569H4 304 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 GKAP1Q5VSY0 366 aaPredicted RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 C12orf56Q8IXR9 622 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 CACNA2D3Q8IZS8 1091 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 U2AF1L4Q8WU68 220 aaKnown RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 HSD17B14Q9BPX1 270 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 EIF2AK1Q9BQI3 630 aaKnown RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 PABPC3Q9H361 631 aaKnown RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 EHMT1Q9H9B1 1298 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 PARVGQ9HBI0 331 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 PI4KBQ9UBF8 816 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 APEX2Q9UBZ4 518 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 PCYOX1Q9UHG3 505 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 TPX2Q9ULW0 747 aaKnown RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.32□□□□□ -0.44
CCDC149-202ENST00000389609 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 ZMYM2Q9UBW7 1377 aa12.32□□□□□ -0.44
CCDC149-202ENST00000389609 MPHOSPH10O00566 681 aaKnown RBP12.31□□□□□ -0.44
CCDC149-202ENST00000389609 DAPK3O43293 454 aa12.31□□□□□ -0.44
CCDC149-202ENST00000389609 BUB1BO60566 1050 aaPredicted RBP12.31□□□□□ -0.44
CCDC149-202ENST00000389609 FAM13AO94988 1023 aa12.31□□□□□ -0.44
CCDC149-202ENST00000389609 SLC8A1P32418 973 aa12.31□□□□□ -0.44
CCDC149-202ENST00000389609 ERMARDQ5T6L9 678 aa12.31□□□□□ -0.44
CCDC149-202ENST00000389609 TCERG1LQ5VWI1 586 aa12.31□□□□□ -0.44
CCDC149-202ENST00000389609 RINT1Q6NUQ1 792 aa12.31□□□□□ -0.44
CCDC149-202ENST00000389609 CDC42EP5Q6NZY7 148 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms