RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
RAPGEF3-201ENST00000389212 NAA35Q5VZE5 725 aa12.71□□□□□ -0.37
RAPGEF3-201ENST00000389212 ADAT2Q7Z6V5 191 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-201ENST00000389212 ZKSCAN4Q969J2 545 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-201ENST00000389212 TBC1D31Q96DN5 1066 aa12.71□□□□□ -0.37
RAPGEF3-201ENST00000389212 HSD17B14Q9BPX1 270 aa12.71□□□□□ -0.37
RAPGEF3-201ENST00000389212 ZEB2O60315 1214 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 CDC25CP30307 473 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 CIITAP33076 1130 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 ITIH3Q06033 890 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 DGKZQ13574 1117 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 HLTFQ14527 1009 aaKnown RBP eCLIP12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 GLYCTKQ8IVS8 523 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 SAAL1Q96ER3 474 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 DDX47Q9H0S4 455 aaKnown RBP12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 PCIF1Q9H4Z3 704 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 RPS6KL1Q9Y6S9 549 aa12.71□□□□□ -0.38
RAPGEF3-201ENST00000389212 PYGLP06737 847 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 ITGA4P13612 1032 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 C1orf186Q6ZWK4 172 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 UNC45AQ9H3U1 944 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 CHORDC1Q9UHD1 332 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 C10orf71Q711Q0 1435 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 TMEM150BA6NC51 233 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 EVI5O60447 810 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 HSF2BPO75031 334 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 ODR4Q5SWX8 454 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 IFT20Q8IY31 132 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 USP38Q8NB14 1042 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 POLR3CQ9BUI4 534 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 TMEM39BQ9GZU3 492 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 PLCB1Q9NQ66 1216 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 NDUFAB1O14561 156 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 PSMD10O75832 226 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 PALB2Q86YC2 1186 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 METTL13Q8N6R0 699 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 LNX1Q8TBB1 728 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 ZNF577Q9BSK1 485 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 PARVGQ9HBI0 331 aa12.7□□□□□ -0.38
RAPGEF3-201ENST00000389212 BRWD3Q6RI45 1802 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 IGSF9BQ9UPX0 1349 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 COPB2P35606 906 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 INHBEP58166 350 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 THEMIS2Q5TEJ8 643 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 EMBQ6PCB8 327 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 DAAM2Q86T65 1068 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 TPCN2Q8NHX9 752 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 ELMO3Q96BJ8 720 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 TAS2R14Q9NYV8 317 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 SNUPNO95149 360 aaKnown RBP12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 GNGT1P63211 74 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 TRAF1Q13077 416 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 PDCLQ13371 301 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 DRAP1Q14919 205 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 BTNL9Q6UXG8 535 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 PEX26Q7Z412 305 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 ZSWIM2Q8NEG5 633 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 OR2W6PQ8NHA6 318 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 HOOK2Q96ED9 719 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 AGBL1Q96MI9 1066 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 LXNQ9BS40 222 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 ZCWPW1Q9H0M4 648 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 GDF3Q9NR23 364 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 DNAJC12Q9UKB3 198 aa12.69□□□□□ -0.38
RAPGEF3-201ENST00000389212 FLOT1O75955 427 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 CPP00450 1065 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 H2AFZP0C0S5 128 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 GALCP54803 685 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 CRYMQ14894 314 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 CFAP58Q5T655 872 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 H2AFVQ71UI9 128 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 SYCP3Q8IZU3 236 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 LRRC57Q8N9N7 239 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 TRIM31Q9BZY9 425 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 ZNF233A6NK53 670 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 HOXA7P31268 230 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 PSMC2P35998 433 aaKnown RBP12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 FMO5P49326 533 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 IRAK1P51617 712 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 PRELPP51888 382 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 JAM2P57087 298 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 DLG4P78352 724 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 HDLBPQ00341 1268 aaKnown RBP12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 PRPF4BQ13523 1007 aaKnown RBP12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 BMT2Q1RMZ1 405 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 CEP55Q53EZ4 464 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 ARHGAP27Q6ZUM4 889 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 IL31RAQ8NI17 732 aa12.68□□□□□ -0.38
RAPGEF3-201ENST00000389212 RSRC1Q96IZ7 334 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms