RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 VSIG10L2P0DP72 767 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PTGS2P35354 604 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 SMAD3P84022 425 aaKnown RBP3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MYBPC3Q14896 1274 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 C2orf27AQ580R0 203 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 TTC38Q5R3I4 469 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 C1QL3Q5VWW1 255 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 KRT40Q6A162 431 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 LAIR1Q6GTX8 287 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ZCCHC8Q6NZY4 707 aaKnown RBP3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 BMP8AQ7Z5Y6 402 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MRGPREQ86SM8 312 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 DDX53Q86TM3 631 aaKnown RBP3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PLA2G15Q8NCC3 412 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 SLC25A43Q8WUT9 341 aaPredicted RBP3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ATXN2LQ8WWM7 1075 aaKnown RBP3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 C16orf92Q96LL3 132 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 HAPLN2Q9GZV7 340 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 SAMD15Q9P1V8 674 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 XDHP47989 1333 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 TMEM191CA6NGB0 347 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 RAPGEF3O95398 923 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 HNRNPLP14866 589 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PTX3P26022 381 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 IGFALSP35858 605 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ARHGAP44Q17R89 818 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 RABL3Q5HYI8 236 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MFSD5Q6N075 450 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 HTR3DQ70Z44 454 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ZNF276Q8N554 614 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 KIAA1958Q8N8K9 716 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ARL8AQ96BM9 186 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ARMC5Q96C12 935 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ZNF512Q96ME7 567 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 TUBGCP5Q96RT8 1024 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MNTQ99583 582 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ACSS2Q9NR19 701 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 NCDNQ9UBB6 729 aa3.94□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PTPDC1A2A3K4 754 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 GRXCR1A8MXD5 290 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 B4E1Z4 1266 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 E9PSI1 815 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 H7C1D1 291 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 IPO13O94829 963 aaKnown RBP3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 CYP17A1P05093 508 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 JUNP05412 331 aaKnown RBP3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 BCAR1P56945 870 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 RBL2Q08999 1139 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ZNF460Q14592 562 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 RHOUQ7L0Q8 258 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MDGA1Q8NFP4 955 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 RPGRQ92834 1020 aaKnown RBP3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 HAS1Q92839 578 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 CLUHP3Q96NS8 147 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MLST8Q9BVC4 326 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 C14orf93Q9H972 538 aaKnown RBP3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 TRPS1Q9UHF7 1281 aa3.93□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PCSK5Q92824 1860 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 GOLGA6L6A8MZA4 724 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PLD2O14939 933 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 OPA1O60313 960 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 STC2O76061 302 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 BMP5P22003 454 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 NR4A1P22736 598 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PROZP22891 400 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 SPIDRQ14159 915 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 EPHA7Q15375 998 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ZNF174Q15697 407 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ESRP1Q6NXG1 681 aaKnown RBP3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 NME9Q86XW9 330 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 VRK3Q8IV63 474 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 CMTM4Q8IZR5 234 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MKL1Q969V6 931 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 C8orf37Q96NL8 207 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PITHD1Q9GZP4 211 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MTG2Q9H4K7 406 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 CABP5Q9NP86 173 aa3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 TNPO3Q9Y5L0 923 aaKnown RBP3.92□□□□□ -1.78
RNU6-1040P-201ENST00000383974 DAPK3O43293 454 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MTSS1O43312 755 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MFAP3LO75121 409 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 DNAJC8O75937 253 aaPredicted RBP3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 GNAT2P19087 354 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 SLC9A1P19634 815 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ADRA1BP35368 520 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 KIR2DL3P43628 341 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 RANGAP1P46060 587 aaPredicted RBP3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 NPEPPSP55786 919 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ADCY2Q08462 1091 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 FAM214AQ32MH5 1076 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PIK3R6Q5UE93 754 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MBNL2Q5VZF2 373 aaKnown RBP3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 NAIF1Q69YI7 327 aaPredicted RBP3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 DPY19L2P1Q6NXN4 242 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 LRRC55Q6ZSA7 311 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 SYNE4Q8N205 404 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 LILRB2Q8N423 598 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 C7orf31Q8N865 590 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PROKR1Q8TCW9 393 aa3.91□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ST8SIA2Q92186 375 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms