RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PALB2Q86YC2 1186 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 NIM1KQ8IY84 436 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 SYT2Q8N9I0 419 aaPredicted RBP17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 A6NNZ2 444 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 ALAS1P13196 640 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 DHX9Q08211 1270 aaKnown RBP17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 SF3B2Q13435 895 aaKnown RBP17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 TUBB8Q3ZCM7 444 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 AADACL2Q6P093 401 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 LDHDQ86WU2 507 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 FAM151AQ8WW52 585 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 FOCADQ5VW36 1801 aa17.64■□□□□ 0.42
NKX3-1-201ENST00000380871 CES2O00748 559 aa17.64■□□□□ 0.42
NKX3-1-201ENST00000380871 EGFRP00533 1210 aa17.64■□□□□ 0.42
NKX3-1-201ENST00000380871 PRKCIP41743 596 aa17.64■□□□□ 0.42
NKX3-1-201ENST00000380871 MAGOHP61326 146 aaKnown RBP17.64■□□□□ 0.42
NKX3-1-201ENST00000380871 MDM1Q8TC05 714 aa17.64■□□□□ 0.42
NKX3-1-201ENST00000380871 MAGOHBQ96A72 148 aaKnown RBP17.64■□□□□ 0.42
NKX3-1-201ENST00000380871 TAS2R14Q9NYV8 317 aa17.64■□□□□ 0.42
NKX3-1-201ENST00000380871 LTBP1Q14766 1721 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 SORBS3O60504 671 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 UBAP2Q5T6F2 1119 aaKnown RBP17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 SLFN11Q7Z7L1 901 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 ERVK-5Q9HDB9 667 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 DDX20Q9UHI6 824 aaKnown RBP17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 ATP8A1Q9Y2Q0 1164 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 TMX2Q9Y320 296 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 BZW2Q9Y6E2 419 aaKnown RBP17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 CYP3A7-CYP3A51PA0A087WV96 503 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 TGFB1I1O43294 461 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 FSBPO95073 299 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 CYP3A7P24462 503 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 C10orf76Q5T2E6 689 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 LRIG3Q6UXM1 1119 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 GLG1Q92896 1179 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 LRRC45Q96CN5 670 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 ARHGEF26Q96DR7 871 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 ZNF577Q9BSK1 485 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 CHORDC1Q9UHD1 332 aaPredicted RBP17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 HERC5Q9UII4 1024 aaKnown RBP17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 CCPG1Q9ULG6 757 aa17.64■□□□□ 0.41
NKX3-1-201ENST00000380871 BHMG1C9JSJ3 638 aaPredicted RBP17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 PDXKO00764 312 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 CALUO43852 315 aaPredicted RBP17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 HOXA7P31268 230 aaPredicted RBP17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 CYP2J2P51589 502 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 CXCL9Q07325 125 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 POTEAQ6S8J7 498 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 CCDC13Q8IYE1 715 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 SLC35G2Q8TBE7 412 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 CHURC1Q8WUH1 139 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 CRYGNQ8WXF5 182 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 CALR3Q96L12 384 aaKnown RBP17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 GJA3Q9Y6H8 435 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 ATP2C2O75185 946 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 TRIM49P0CI25 452 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 TRIM49CP0CI26 452 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 IFI16Q16666 785 aaKnown RBP17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 KRT71Q3SY84 523 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 HES6Q96HZ4 224 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 FAM20AQ96MK3 541 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 TYW1Q9NV66 732 aaKnown RBP17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 SEPT11Q9NVA2 429 aaKnown RBP17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 SUCLA2Q9P2R7 463 aaPredicted RBP17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 ZMYM2Q9UBW7 1377 aa17.63■□□□□ 0.41
NKX3-1-201ENST00000380871 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 SHBGP04278 402 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 FKBP1AP62942 108 aaKnown RBP17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 CBWD6Q4V339 395 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 CBWD3Q5JTY5 395 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 CBWD5Q5RIA9 395 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 RASGEF1CQ8N431 466 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 ATP8B4Q8TF62 1192 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 MBOAT7Q96N66 472 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 RAVER2Q9HCJ3 691 aaKnown RBP17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 CD248Q9HCU0 757 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 VAV3Q9UKW4 847 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 GMNCA6NCL1 334 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 PHF20L1A8MW92 1017 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 VCPKMTQ9H867 229 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 ATXN2Q99700 1313 aaKnown RBP17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 F8VZ95 297 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 NFIBO00712 420 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 TRAPPC3O43617 180 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 MYCLP12524 364 aaPredicted RBP17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 RASA3Q14644 834 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 Q4G0T1 1027 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 RINT1Q6NUQ1 792 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 C6orf89Q6UWU4 347 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 C1orf131Q8NDD1 294 aaKnown RBP17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 RAPGEF5Q92565 580 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 TMOD4Q9NZQ9 345 aa17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 CTDP1Q9Y5B0 961 aaPredicted RBP17.62■□□□□ 0.41
NKX3-1-201ENST00000380871 ASTN2O75129 1339 aaPredicted RBP17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 TMEM150BA6NC51 233 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 LRRN2O75325 713 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 SP4Q02446 784 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 DRAP1Q14919 205 aaPredicted RBP17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 HOOK2Q96ED9 719 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 PAGR1Q9BTK6 254 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms