RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 MYL10Q9BUA6 226 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ATP8A1Q9Y2Q0 1164 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 WDR91A4D1P6 747 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 TBXAS1P24557 533 aaPredicted RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 NUP62P37198 522 aaPredicted RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF568Q3ZCX4 644 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 SSH2Q76I76 1423 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 USP17L3A6NCW0 530 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 USP17L4A6NCW7 530 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 SLFN14P0C7P3 912 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ANGPT1Q15389 498 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 USP17L1Q7RTZ2 530 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 BRIP1Q9BX63 1249 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 MLNP12872 115 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 TRPC1P48995 793 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 PDCLQ13371 301 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 CAB39Q9Y376 341 aaPredicted RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF235Q14590 738 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 CATSPER3Q86XQ3 398 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 SMARCAL1Q9NZC9 954 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 TBK1Q9UHD2 729 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF229Q9UJW7 825 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 BCAS4Q8TDM0 211 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ADCK2Q7Z695 626 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 RAPGEF5Q92565 580 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 MRGBPQ9NV56 204 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 DBNLQ9UJU6 430 aaKnown RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 DDIT3P35638 169 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 CAV1Q03135 178 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF667Q5HYK9 610 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 TTC13Q8NBP0 860 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 CARD9Q9H257 536 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF407Q9C0G0 2248 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 CFAP99D6REC4 459 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 KLHL38Q2WGJ6 581 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 TEX2Q8IWB9 1127 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 PI4KBQ9UBF8 816 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 EIF3BP55884 814 aaKnown RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 PPP1R2P1Q96PQ5 205 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 UTP6Q9NYH9 597 aaKnown RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 EPN1Q9Y6I3 576 aaPredicted RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 USP17L12C9JPN9 530 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 USP17L21D6R901 530 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 KRT77Q7Z794 578 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 RTKN2Q8IZC4 609 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 CEP70Q8NHQ1 597 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 S100A5P33763 92 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 EIF2S1P05198 315 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 JAK3P52333 1124 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 PITPNM3Q9BZ71 974 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 BLOC1S6Q9UL45 172 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 GDAQ9Y2T3 454 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 UGGT2Q9NYU1 1516 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 EDC4Q6P2E9 1401 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 SGSM2O43147 1006 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 AKT1P31749 480 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 PMS1P54277 932 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 MAPRE2Q15555 327 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 TRIP4Q15650 581 aaPredicted RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 BRAFP15056 766 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 PPP3CCP48454 512 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 SPATA1Q5VX52 437 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 MAP10Q9P2G4 905 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 MEFVO15553 781 aaPredicted RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 GCP02774 474 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 PFKFB1P16118 471 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 ADCY2Q08462 1091 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 TBC1D1Q86TI0 1168 aaPredicted RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF341Q9BYN7 854 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 A2MP01023 1474 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 CDK17Q00537 523 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 SH3BP1Q9Y3L3 701 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 K7ERI5 159 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 TP53BP2Q13625 1128 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 CNPY4Q8N129 248 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 TMEM245Q9H330 911 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 FOXP1Q9H334 677 aaPredicted RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 FBXO40Q9UH90 709 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 DTNAQ9Y4J8 743 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 NUP160Q12769 1436 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 FRMD3A2A2Y4 597 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 NEURL1BA8MQ27 555 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 ARHGEF7Q14155 803 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 HEATR6Q6AI08 1181 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 TRIM69Q86WT6 500 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 ICA1LQ8NDH6 482 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 KRT16P08779 473 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 ABCE1P61221 599 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 FASTKD1Q53R41 847 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 SMYD3Q9H7B4 428 aa11.92□□□□□ -0.5
PTCHD1-201ENST00000379361 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 NLRP9Q7RTR0 991 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 TSPAN17Q96FV3 270 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms