RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 BHMT2Q9H2M3 363 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 VCX3AQ9NNX9 186 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 INTS9Q9NV88 658 aaKnown RBP11.6□□□□□ -0.55
HIF3A-205ENST00000377670 LSM7Q9UK45 103 aaKnown RBP11.6□□□□□ -0.55
HIF3A-205ENST00000377670 RICTORQ6R327 1708 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 CLDN3O15551 220 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 PPARGP37231 505 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-205ENST00000377670 GCLCP48506 637 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-205ENST00000377670 NAA35Q5VZE5 725 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 SWSAP1Q6NVH7 229 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 LRRC31Q6UY01 552 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 TRIML1Q8N9V2 468 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 PCSK9Q8NBP7 692 aaKnown RBP11.6□□□□□ -0.55
HIF3A-205ENST00000377670 MORC4Q8TE76 937 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 ANKRD65E5RJM6 399 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 H7C0C1 242 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 ATP5OP48047 213 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 IGDCC4Q8TDY8 1250 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 STARD7Q9NQZ5 370 aa11.6□□□□□ -0.55
HIF3A-205ENST00000377670 TDP2O95551 362 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 PSMC2P35998 433 aaKnown RBP11.59□□□□□ -0.55
HIF3A-205ENST00000377670 RWDD4Q6NW29 188 aaKnown RBP11.59□□□□□ -0.55
HIF3A-205ENST00000377670 SH3TC2Q8TF17 1288 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 ATP2A3Q93084 1043 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 SFNP31947 248 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 ZNF667Q5HYK9 610 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 GLB1LQ6UWU2 654 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 SH2D3AQ9BRG2 576 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 USP32Q8NFA0 1604 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 RPAP1Q9BWH6 1393 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-205ENST00000377670 SPECC1L-ADORA2AF8WAN1 911 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 GOLGA8SH3BPF8 625 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 LRRN2O75325 713 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 ENTPD3O75355 529 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 EHHADHQ08426 723 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 ALX1Q15699 326 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 LRRC8CQ8TDW0 803 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 WHAMMQ8TF30 809 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 FAM151AQ8WW52 585 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 ABTB1Q969K4 478 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-205ENST00000377670 PARVGQ9HBI0 331 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 CPA4Q9UI42 421 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 PLA2G4BP0C869 781 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 EPHB4P54760 987 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 POLE2P56282 527 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 ERO1BQ86YB8 467 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 TEX2Q8IWB9 1127 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-205ENST00000377670 ZNF653Q96CK0 615 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 DDX50Q9BQ39 737 aaKnown RBP11.59□□□□□ -0.55
HIF3A-205ENST00000377670 TMEM39AQ9NV64 488 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 NCOA3Q9Y6Q9 1424 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 FLT1P17948 1338 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 KIF20BQ96Q89 1820 aa11.59□□□□□ -0.55
HIF3A-205ENST00000377670 MAP3K13O43283 966 aa11.58□□□□□ -0.55
HIF3A-205ENST00000377670 SUPT20HL2P0C7V6 817 aa11.58□□□□□ -0.55
HIF3A-205ENST00000377670 RALAP11233 206 aa11.58□□□□□ -0.55
HIF3A-205ENST00000377670 PEX3P56589 373 aa11.58□□□□□ -0.55
HIF3A-205ENST00000377670 NXNQ6DKJ4 435 aa11.58□□□□□ -0.55
HIF3A-205ENST00000377670 MYLK4Q86YV6 388 aaPredicted RBP11.58□□□□□ -0.55
HIF3A-205ENST00000377670 P2RX5Q93086 422 aa11.58□□□□□ -0.55
HIF3A-205ENST00000377670 ZNF668Q96K58 619 aaPredicted RBP11.58□□□□□ -0.55
HIF3A-205ENST00000377670 E9PMD0 336 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 MYO1CO00159 1063 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 PNMA6AP0CW24 399 aaPredicted RBP11.58□□□□□ -0.56
HIF3A-205ENST00000377670 MAPK4P31152 587 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 ALCAMQ13740 583 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 RPS6KA2Q15349 733 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 TAF11Q15544 211 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 QRICH1Q2TAL8 776 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 RESP18Q5W5W9 173 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 RFX6Q8HWS3 928 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 EPB41L5Q9HCM4 733 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 CNTNAP4Q9C0A0 1308 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 PHBP35232 272 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 DDIT3P35638 169 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 TADA2BQ86TJ2 420 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 CXorf38Q8TB03 319 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 GABBR1Q9UBS5 961 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 GOLGA8IPA6NC78 632 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 SOWAHDA6NJG2 315 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 GOLGA8JA6NMD2 632 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 GSTA1P08263 222 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 GSTA2P09210 222 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 ALDH7A1P49419 539 aaKnown RBP11.58□□□□□ -0.56
HIF3A-205ENST00000377670 ADCY1Q08828 1119 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 NNTQ13423 1086 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 ZKSCAN8Q15776 578 aaPredicted RBP11.58□□□□□ -0.56
HIF3A-205ENST00000377670 DBN1Q16643 649 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 ZNF658Q5TYW1 1059 aaPredicted RBP11.58□□□□□ -0.56
HIF3A-205ENST00000377670 GRK7Q8WTQ7 553 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 TMEM169Q96HH4 297 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 PNPLA7Q6ZV29 1317 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 CTNND1O60716 968 aaKnown RBP11.58□□□□□ -0.56
HIF3A-205ENST00000377670 LRG1P02750 347 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 SHC4Q6S5L8 630 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 ACRBPQ8NEB7 543 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 SIGLEC1Q9BZZ2 1709 aa11.58□□□□□ -0.56
HIF3A-205ENST00000377670 MX2P20592 715 aa11.57□□□□□ -0.56
HIF3A-205ENST00000377670 SAT1P21673 171 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms