RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 ACSL3O95573 720 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 GCKP35557 465 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 C7orf31Q8N865 590 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 GJD4Q96KN9 370 aaPredicted RBP20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ARHGEF28Q8N1W1 1705 aaKnown RBP20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SLIT1O75093 1534 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ITPK1Q13572 414 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 BBS5Q8N3I7 341 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 TMEM35BQ8NCS4 154 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 MICAL1Q8TDZ2 1067 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 HVCN1Q96D96 273 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 FAM213AQ9BRX8 229 aa20.05■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ZNF667Q5HYK9 610 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 KRT39Q6A163 491 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SMIM5Q71RC9 77 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ABI1Q8IZP0 508 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 PDIK1LQ8N165 341 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 CFAP61Q8NHU2 1237 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ZNF526Q8TF50 670 aaPredicted RBP20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ADGRB2O60241 1585 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SMARCA1P28370 1054 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SOX5P35711 763 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ECE1P42892 770 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 STK4Q13043 487 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 PDCLQ13371 301 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 HDAC11Q96DB2 347 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SLC16A3O15427 465 aaKnown RBP20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 PSMA2P25787 234 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 MARK3P27448 753 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 CEP55Q53EZ4 464 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ZNF564Q8TBZ8 553 aaPredicted RBP20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 MORC4Q8TE76 937 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SPATA4Q8NEY3 305 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 RFFLQ8WZ73 363 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SNX12Q9UMY4 172 aa20.04■□□□□ 0.8
CNTNAP3B-203ENST00000377561 FTLP02792 175 aaPredicted RBP20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 FDX1P10109 184 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 BBS9Q3SYG4 887 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 RSRC2Q7L4I2 434 aaKnown RBP20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 CCNYQ8ND76 341 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 KLHL29Q96CT2 875 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 TBX3O15119 743 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 PTPAQ15257 358 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 THNSL1Q8IYQ7 743 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 RUBCNQ92622 972 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 AP5M1Q9H0R1 490 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 DDX47Q9H0S4 455 aaKnown RBP20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 TAF1DQ9H5J8 278 aaPredicted RBP20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SLITRK6Q9H5Y7 841 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 NYAP2Q9P242 653 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SSU72P8A0A1W2PR75 194 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 PDHBP11177 359 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 GLYCTKQ8IVS8 523 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 PYROXD1Q8WU10 500 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 HAUS8Q9BT25 410 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 NUP85Q9BW27 656 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ZHX2Q9Y6X8 837 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 PFASO15067 1338 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 GPC4O75487 556 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 TRIM49P0CI25 452 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 TRIM49CP0CI26 452 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 SRGAP2BP0DMP2 458 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 MAPK6Q16659 721 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 COG1Q8WTW3 980 aa20.03■□□□□ 0.8
CNTNAP3B-203ENST00000377561 ESYT3A0FGR9 886 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 TYW5A2RUC4 315 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 MYMKA6NI61 221 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 CHRNA3P32297 505 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 CAV1Q03135 178 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 TROAPQ12815 778 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 RBM43Q6ZSC3 357 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 LDHDQ86WU2 507 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 GABBR1Q9UBS5 961 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 VPS72Q15906 364 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 STRIP1Q5VSL9 837 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 TMEM270Q6UE05 265 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 RAD9BQ6WBX8 426 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 MTRQ99707 1265 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 DNAJC17Q9NVM6 304 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 PACSIN2Q9UNF0 486 aaPredicted RBP20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 BAG2O95816 211 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 S100BP04271 92 aaPredicted RBP20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 CALB1P05937 261 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 LRRC4Q9HBW1 653 aa20.02■□□□□ 0.8
CNTNAP3B-203ENST00000377561 NPHP3-ACAD11A0A0J9YXS1 232 aa20.02■□□□□ 0.79
CNTNAP3B-203ENST00000377561 TBXAS1P24557 533 aaPredicted RBP20.02■□□□□ 0.79
CNTNAP3B-203ENST00000377561 VSNL1P62760 191 aa20.02■□□□□ 0.79
CNTNAP3B-203ENST00000377561 GRIN1Q05586 938 aa20.02■□□□□ 0.79
CNTNAP3B-203ENST00000377561 GDAP1Q8TB36 358 aa20.02■□□□□ 0.79
CNTNAP3B-203ENST00000377561 WRNIP1Q96S55 665 aa20.02■□□□□ 0.79
CNTNAP3B-203ENST00000377561 TMEM60Q9H2L4 133 aa20.02■□□□□ 0.79
CNTNAP3B-203ENST00000377561 EMSYQ7Z589 1322 aa20.01■□□□□ 0.79
CNTNAP3B-203ENST00000377561 FAM187AA6NFU0 413 aa20.01■□□□□ 0.79
CNTNAP3B-203ENST00000377561 ASPHQ12797 758 aa20.01■□□□□ 0.79
CNTNAP3B-203ENST00000377561 SLC18A3Q16572 532 aa20.01■□□□□ 0.79
CNTNAP3B-203ENST00000377561 HHIPL2Q6UWX4 724 aa20.01■□□□□ 0.79
CNTNAP3B-203ENST00000377561 ENOSF1Q7L5Y1 443 aa20.01■□□□□ 0.79
CNTNAP3B-203ENST00000377561 ZWILCHQ9H900 591 aa20.01■□□□□ 0.79
CNTNAP3B-203ENST00000377561 AGPAT5Q9NUQ2 364 aa20.01■□□□□ 0.79
CNTNAP3B-203ENST00000377561 ANXA13P27216 316 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms