RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
GPC6-201ENST00000377047 PANX2Q96RD6 677 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 KLC2Q9H0B6 622 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 SCAF8Q9UPN6 1271 aaKnown RBP14.58□□□□□ -0.08
GPC6-201ENST00000377047 CAMTA2O94983 1202 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 CALB1P05937 261 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 TBXAS1P24557 533 aaPredicted RBP14.58□□□□□ -0.08
GPC6-201ENST00000377047 PRCPP42785 496 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 ACCSLQ4AC99 568 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 RBAKQ9NYW8 714 aaPredicted RBP14.58□□□□□ -0.08
GPC6-201ENST00000377047 HIP1RO75146 1068 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 MOCS2O96007 188 aaPredicted RBP14.58□□□□□ -0.08
GPC6-201ENST00000377047 STAT5BP51692 787 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 SESN3P58005 492 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 NSUN2Q08J23 767 aaKnown RBP eCLIP14.58□□□□□ -0.08
GPC6-201ENST00000377047 KCNH2Q12809 1159 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 PHLDB3Q6NSJ2 640 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 PNPLA7Q6ZV29 1317 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 RFX7Q2KHR2 1363 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 USP11P51784 963 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 ORC2Q13416 577 aaPredicted RBP14.58□□□□□ -0.08
GPC6-201ENST00000377047 MARCH10Q8NA82 808 aaPredicted RBP14.58□□□□□ -0.08
GPC6-201ENST00000377047 RNF149Q8NC42 400 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 PDZD8Q8NEN9 1154 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 RBM46Q8TBY0 533 aaKnown RBP14.58□□□□□ -0.08
GPC6-201ENST00000377047 RNF217Q8TC41 542 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 RABGGTAQ92696 567 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 C11orf70Q9BRQ4 267 aa14.58□□□□□ -0.08
GPC6-201ENST00000377047 GSTA4O15217 222 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 GNA15P30679 374 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 CENPUQ71F23 418 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 STRIP2Q9ULQ0 834 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 YWHABP31946 246 aaKnown RBP14.57□□□□□ -0.08
GPC6-201ENST00000377047 GMPSP49915 693 aaPredicted RBP14.57□□□□□ -0.08
GPC6-201ENST00000377047 TRIM67Q6ZTA4 783 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 GPD1LQ8N335 351 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 HEMGNQ9BXL5 484 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 DYNC1LI2O43237 492 aaPredicted RBP14.57□□□□□ -0.08
GPC6-201ENST00000377047 CTSHP09668 335 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 KCNJ6P48051 423 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 CDC42EP5Q6NZY7 148 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 ATG9AQ7Z3C6 839 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 BCAS4Q8TDM0 211 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 MED4Q9NPJ6 270 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 MAP3K20Q9NYL2 800 aaKnown RBP14.57□□□□□ -0.08
GPC6-201ENST00000377047 RNF14Q9UBS8 474 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 CYP2B6P20813 491 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 YWHAHQ04917 246 aaPredicted RBP14.57□□□□□ -0.08
GPC6-201ENST00000377047 FRA10AC1Q70Z53 315 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 GAS2L3Q86XJ1 694 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 PDIK1LQ8N165 341 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 INTS2Q9H0H0 1204 aaKnown RBP14.57□□□□□ -0.08
GPC6-201ENST00000377047 PVALEFA0A1B0GWK0 134 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 C6orf222P0C671 652 aaPredicted RBP14.57□□□□□ -0.08
GPC6-201ENST00000377047 DPEP1P16444 411 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 VEPH1Q14D04 833 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 SUCLA2Q9P2R7 463 aaPredicted RBP14.57□□□□□ -0.08
GPC6-201ENST00000377047 SEL1LQ9UBV2 794 aa14.57□□□□□ -0.08
GPC6-201ENST00000377047 AGO2Q9UKV8 859 aaKnown RBP14.57□□□□□ -0.08
GPC6-201ENST00000377047 C19orf81C9J6K1 198 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 MFAP3LO75121 409 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 SUN1O94901 812 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 FGGP02679 453 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 PRR29P0C7W0 189 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 SDC4P31431 198 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 SSTR3P32745 418 aaPredicted RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 SLC7A5Q01650 507 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 FGD4Q96M96 766 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 WDR91A4D1P6 747 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 F5H423 210 aaPredicted RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 EVI5O60447 810 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 CLNS1AP54105 237 aaKnown RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 GABPB1Q06547 395 aaPredicted RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 BAATQ14032 418 aaPredicted RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 GBP7Q8N8V2 638 aaPredicted RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 RBM41Q96IZ5 413 aaKnown RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 TEX13BQ9BXU2 312 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 G3BP2Q9UN86 482 aaKnown RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 USP31Q70CQ4 1352 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 GNGT2O14610 69 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 GPC5P78333 572 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 YAF2Q8IY57 180 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 ACAP3Q96P50 834 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 STAP1Q9ULZ2 295 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 A0A1B0GUA9 196 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 TTI1O43156 1089 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 SEC31AO94979 1220 aaKnown RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 PSMC1P62191 440 aaKnown RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 TRIM28Q13263 835 aaKnown RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 SPDL1Q96EA4 605 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 PLA2G12BQ9BX93 195 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 PCSK1NQ9UHG2 260 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 CAPN7Q9Y6W3 813 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 CACNB2Q08289 660 aaPredicted RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 ZNF34Q8IZ26 560 aa14.56□□□□□ -0.08
GPC6-201ENST00000377047 GPBP1L1Q9HC44 474 aaPredicted RBP14.56□□□□□ -0.08
GPC6-201ENST00000377047 EPHA7Q15375 998 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 SF3B3Q15393 1217 aaKnown RBP14.55□□□□□ -0.08
GPC6-201ENST00000377047 HP1BP3Q5SSJ5 553 aaPredicted RBP14.55□□□□□ -0.08
GPC6-201ENST00000377047 LPAR1Q92633 364 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms