RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 AFG3L2Q9Y4W6 797 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 TARSL2A2RTX5 802 aaKnown RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 SPDYE16A6NNV3 312 aaPredicted RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 F5H6K3 240 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 KIF3CO14782 793 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 GTF2A2P52657 109 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 PEX3P56589 373 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 KLRC3Q07444 240 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 SCARF1Q14162 830 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 SPDYE2Q495Y8 402 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 IGDCC4Q8TDY8 1250 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 RPAP3Q9H6T3 665 aaPredicted RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 TBXAS1P24557 533 aaPredicted RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 GPC5P78333 572 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 PCGF5Q86SE9 256 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 ADARB2Q9NS39 739 aaKnown RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 MAGEB2O15479 319 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 CAV1Q03135 178 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 TERF2Q15554 542 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 TRIM68Q6AZZ1 485 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 TADA2BQ86TJ2 420 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 GUF1Q8N442 669 aaKnown RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 TAB3Q8N5C8 712 aaPredicted RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 TRIM56Q9BRZ2 755 aaKnown RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 ADGRB2O60241 1585 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 VWDEQ8N2E2 1590 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 EXOC1LA0A1B0GW35 172 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 SFI1A8K8P3 1242 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 EFNA5P52803 228 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 CENPUQ71F23 418 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 SAMD3Q8N6K7 520 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 BANK1Q8NDB2 785 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 FAM84BQ96KN1 310 aaPredicted RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 KCNQ2O43526 872 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 PRPSAP2O60256 369 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 PLS3P13797 630 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 CA4P22748 312 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 QARSP47897 775 aaKnown RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 PSMD6Q15008 389 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 RNF219Q5W0B1 726 aaPredicted RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 FAM151AQ8WW52 585 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 A0A0G2JLW4 131 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 EFHBQ8N7U6 833 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 CEP120Q8N960 986 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 LIMA1Q9UHB6 759 aaKnown RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 ESYT2A0FGR8 921 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 GOLGA8SH3BPF8 625 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 ALDH1A1P00352 501 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 S100BP04271 92 aaPredicted RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 GUCY1A2P33402 732 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 KPNA2P52292 529 aaKnown RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 VEPH1Q14D04 833 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 MORC4Q8TE76 937 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 PGBD4Q96DM1 585 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 KCNF1Q9H3M0 494 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 CYP4F22Q6NT55 531 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 E9PMD0 336 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 IPO5O00410 1097 aaKnown RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 NNMTP40261 264 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 DYNLT1P63172 113 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 FRMD5Q7Z6J6 570 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 NEDD1Q8NHV4 660 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 BAG2O95816 211 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 PDE1BQ01064 536 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 ASPHQ12797 758 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 DPYDQ12882 1025 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 IFRD2Q12894 506 aaPredicted RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 MXD4Q14582 209 aaPredicted RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 SBK1Q52WX2 424 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 RAPH1Q70E73 1250 aa11.75□□□□□ -0.53
MDC1-201ENST00000376406 ELOA2Q8IYF1 753 aaPredicted RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 SRBD1Q8N5C6 995 aaKnown RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.75□□□□□ -0.53
MDC1-201ENST00000376406 SYNJ2BP-COX16A0A087WUM0 186 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 IQANK1A0A1B0GTG1 560 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 A0A1B0GTH6 734 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 POTECB2RU33 542 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 HUS1O60921 280 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 KRT39Q6A163 491 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 XXYLT1Q8NBI6 393 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 SPATA33Q96N06 139 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 MYOZ2Q9NPC6 264 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 COX16Q9P0S2 106 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 TEX33O43247 280 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 CSF1RP07333 972 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 GGCXP38435 758 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 GCLCP48506 637 aaPredicted RBP11.74□□□□□ -0.53
MDC1-201ENST00000376406 CPT1AP50416 773 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 FCGRTP55899 365 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 BASP1P80723 227 aaKnown RBP11.74□□□□□ -0.53
MDC1-201ENST00000376406 PDIA5Q14554 519 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms