RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 ALG3Q92685 438 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 TRIM6Q9C030 488 aaPredicted RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 LRRC27Q9C0I9 530 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 KIF13BQ9NQT8 1826 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 NAV1Q8NEY1 1877 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 CLIC2O15247 247 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 RGS16O15492 202 aaPredicted RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 KRT18P05783 430 aaKnown RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 LDHBP07195 334 aaKnown RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 PRKCIP41743 596 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 EIF3BP55884 814 aaKnown RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 SIK1P57059 783 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 NCALDP61601 193 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 HOOK3Q86VS8 718 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 ZDHHC14Q8IZN3 488 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 RIOX1Q9H6W3 641 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 CHORDC1Q9UHD1 332 aaPredicted RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 C15orf41Q9Y2V0 281 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 DAAM1Q9Y4D1 1078 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 MAST2Q6P0Q8 1798 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 AFF2P51816 1311 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 KIAA0391O15091 583 aaKnown RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 NUDT17P0C025 328 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 ITIH4Q14624 930 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 OTUD6AQ7L8S5 288 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 JAMLQ86YT9 394 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 GRHL1Q9NZI5 618 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 GCNT4Q9P109 453 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 PNMA3Q9UL41 463 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 COG5Q9UP83 839 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 ARFGEF1Q9Y6D6 1849 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 ESYT2A0FGR8 921 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 ANKRD62A6NC57 917 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 ANKRD63C9JTQ0 380 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 RPL21P46778 160 aaKnown RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 MARCKSL1P49006 195 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 ORC2Q13416 577 aaPredicted RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 PUS10Q3MIT2 529 aaKnown RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 MARCH10Q8NA82 808 aaPredicted RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 PGM2Q96G03 612 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 TMEM165Q9HC07 324 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 SAMD15Q9P1V8 674 aa12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 BZW2Q9Y6E2 419 aaKnown RBP12.43□□□□□ -0.42
TM9SF2-201ENST00000376387 RSPH10B2B2RC85 870 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 DIAPH2O60879 1101 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 KRT16P08779 473 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 RSPH10BP0C881 870 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 PLS1Q14651 629 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 KIAA1755Q5JYT7 1200 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 TTBK2Q6IQ55 1244 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 BZW1Q7L1Q6 419 aaKnown RBP12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 TAX1BP1Q86VP1 789 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 LMBR1Q8WVP7 490 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 RSRC1Q96IZ7 334 aaKnown RBP12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 RAB17Q9H0T7 212 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 IGF2BP3O00425 579 aaKnown RBP eCLIP12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 EVI5O60447 810 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 UPP2O95045 317 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 GSTA1P08263 222 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 KRT13P13646 458 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 NQO1P15559 274 aaKnown RBP12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 SLC16A2P36021 539 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 SLC12A3P55017 1021 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 TTC27Q6P3X3 843 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 SFR1Q86XK3 245 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 SLC30A5Q8TAD4 765 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 ECT2Q9H8V3 914 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 PLCG2P16885 1265 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 PPATQ06203 517 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 SEPT2Q15019 361 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 CNGA2Q16280 664 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 MAEAQ7L5Y9 396 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 SYCE1Q8N0S2 351 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 MAB21L3Q8N8X9 362 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 HOOK2Q96ED9 719 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 THAP2Q9H0W7 228 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 STK38LQ9Y2H1 464 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
TM9SF2-201ENST00000376387 A0A0A6YYK5 440 aaPredicted RBP12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 PTGIRP43119 386 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 PABPC4Q13310 644 aaKnown RBP eCLIP12.41□□□□□ -0.428e-8■■■■□ 19.5
TM9SF2-201ENST00000376387 ZNF268Q14587 947 aaPredicted RBP12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 EDRF1Q3B7T1 1238 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 TBC1D9BQ66K14 1250 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 C16orf86Q6ZW13 317 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 FRMD5Q7Z6J6 570 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 ERICH1Q86X53 443 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 KRT35Q92764 455 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms