RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 GPATCH4Q5T3I0 446 aaKnown RBP22.87■■□□□ 1.25
UPF3A-202ENST00000375299 CROCCP2Q86T23 111 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 ARHGEF26Q96DR7 871 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 SYT11Q9BT88 431 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 BAIAP2L1Q9UHR4 511 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 CNOT7Q9UIV1 285 aaKnown RBP22.87■■□□□ 1.25
UPF3A-202ENST00000375299 TRPC6Q9Y210 931 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 GAKO14976 1311 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 RPTORQ8N122 1335 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 MYO3BQ8WXR4 1341 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 SMIM23A6NLE4 172 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 IFI35P80217 286 aaPredicted RBP22.87■■□□□ 1.25
UPF3A-202ENST00000375299 SLC29A2Q14542 456 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 C6orf118Q5T5N4 469 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 BORCS6Q96GS4 357 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 STK33Q9BYT3 514 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 GLT8D2Q9H1C3 349 aa22.87■■□□□ 1.25
UPF3A-202ENST00000375299 RSPH10B2B2RC85 870 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 UFL1O94874 794 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 GCNT3O95395 438 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 RSPH10BP0C881 870 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 IL1R1P14778 569 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 RPA1P27694 616 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 SLF2Q8IX21 1173 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 PRMT1Q99873 361 aaKnown RBP22.86■■□□□ 1.25
UPF3A-202ENST00000375299 ELAC2Q9BQ52 826 aaKnown RBP22.86■■□□□ 1.25
UPF3A-202ENST00000375299 GRHL1Q9NZI5 618 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 C10orf71Q711Q0 1435 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 AFF2P51816 1311 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 CFAP73A6NFT4 308 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 PHF2O75151 1096 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 SPATA31C1P0DKV0 1188 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 KRT13P13646 458 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 VCAM1P19320 739 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 PTGIRP43119 386 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 DRAP1Q14919 205 aaPredicted RBP22.86■■□□□ 1.25
UPF3A-202ENST00000375299 MOXD1Q6UVY6 613 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 TRPM8Q7Z2W7 1104 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 NSRP1Q9H0G5 558 aaKnown RBP22.86■■□□□ 1.25
UPF3A-202ENST00000375299 DNAJC12Q9UKB3 198 aa22.86■■□□□ 1.25
UPF3A-202ENST00000375299 KCTD1Q719H9 257 aa22.85■■□□□ 1.25
UPF3A-202ENST00000375299 ETNPPLQ8TBG4 499 aa22.85■■□□□ 1.25
UPF3A-202ENST00000375299 ALG3Q92685 438 aa22.85■■□□□ 1.25
UPF3A-202ENST00000375299 RPGRQ92834 1020 aaKnown RBP22.85■■□□□ 1.25
UPF3A-202ENST00000375299 TMEM109Q9BVC6 243 aa22.85■■□□□ 1.25
UPF3A-202ENST00000375299 GBP1P32455 592 aa22.85■■□□□ 1.25
UPF3A-202ENST00000375299 SF3A3Q12874 501 aaKnown RBP eCLIP22.85■■□□□ 1.254e-6■■■■□ 22.2
UPF3A-202ENST00000375299 RIPK1Q13546 671 aa22.85■■□□□ 1.25
UPF3A-202ENST00000375299 CRYMQ14894 314 aa22.85■■□□□ 1.25
UPF3A-202ENST00000375299 PRR5LQ6MZQ0 368 aa22.85■■□□□ 1.25
UPF3A-202ENST00000375299 THAP2Q9H0W7 228 aa22.85■■□□□ 1.25
UPF3A-202ENST00000375299 SYNGAP1Q96PV0 1343 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 TBCAO75347 108 aaKnown RBP22.84■■□□□ 1.25
UPF3A-202ENST00000375299 VIMP08670 466 aaKnown RBP22.84■■□□□ 1.25
UPF3A-202ENST00000375299 CLNS1AP54105 237 aaKnown RBP22.84■■□□□ 1.25
UPF3A-202ENST00000375299 KCNA1Q09470 495 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 PICALMQ13492 652 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 BTNL9Q6UXG8 535 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 CRELD2Q6UXH1 353 aaPredicted RBP22.84■■□□□ 1.25
UPF3A-202ENST00000375299 FAM186BQ8IYM0 893 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 C18orf8Q96DM3 657 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 TBC1D31Q96DN5 1066 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 GPR88Q9GZN0 384 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 SEMA4AQ9H3S1 761 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 TMOD4Q9NZQ9 345 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 MTRF1LQ9UGC7 380 aaKnown RBP22.84■■□□□ 1.25
UPF3A-202ENST00000375299 PARP2Q9UGN5 583 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 TGFB1I1O43294 461 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 HSPA6P17066 643 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 ATP2B4P23634 1241 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 CHRNA3P32297 505 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 MFSD14BQ5SR56 506 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 FAM196AQ6ZSG2 479 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 TCP11Q8WWU5 503 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 MTFR1LQ9H019 292 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 STMN4Q9H169 189 aaPredicted RBP22.84■■□□□ 1.25
UPF3A-202ENST00000375299 COG5Q9UP83 839 aa22.84■■□□□ 1.25
UPF3A-202ENST00000375299 FRMPD4Q14CM0 1322 aa22.83■■□□□ 1.25
UPF3A-202ENST00000375299 ANKRD62A6NC57 917 aa22.83■■□□□ 1.25
UPF3A-202ENST00000375299 TNFAIP3P21580 790 aa22.83■■□□□ 1.25
UPF3A-202ENST00000375299 PSMC2P35998 433 aaKnown RBP22.83■■□□□ 1.25
UPF3A-202ENST00000375299 RPL21P46778 160 aaKnown RBP22.83■■□□□ 1.25
UPF3A-202ENST00000375299 UBAP2Q5T6F2 1119 aaKnown RBP22.83■■□□□ 1.25
UPF3A-202ENST00000375299 EPS8L3Q8TE67 593 aaKnown RBP22.83■■□□□ 1.25
UPF3A-202ENST00000375299 BCAS3Q9H6U6 928 aa22.83■■□□□ 1.25
UPF3A-202ENST00000375299 GGA1Q9UJY5 639 aa22.83■■□□□ 1.25
UPF3A-202ENST00000375299 LY75O60449 1722 aa22.83■■□□□ 1.25
UPF3A-202ENST00000375299 A0A1B0GUA9 196 aa22.83■■□□□ 1.24
UPF3A-202ENST00000375299 PPP1R12BO60237 982 aaPredicted RBP22.83■■□□□ 1.24
UPF3A-202ENST00000375299 GBP2P32456 591 aaPredicted RBP22.83■■□□□ 1.24
UPF3A-202ENST00000375299 FMO5P49326 533 aa22.83■■□□□ 1.24
UPF3A-202ENST00000375299 PRR16Q569H4 304 aa22.83■■□□□ 1.24
UPF3A-202ENST00000375299 FAM133BQ5BKY9 247 aaKnown RBP22.83■■□□□ 1.24
UPF3A-202ENST00000375299 TNFAIP8L3Q5GJ75 292 aa22.83■■□□□ 1.24
UPF3A-202ENST00000375299 TBC1D1Q86TI0 1168 aaPredicted RBP22.83■■□□□ 1.24
UPF3A-202ENST00000375299 RUSC1Q9BVN2 902 aa22.83■■□□□ 1.24
UPF3A-202ENST00000375299 TAS2R14Q9NYV8 317 aa22.83■■□□□ 1.24
UPF3A-202ENST00000375299 ZMYM2Q9UBW7 1377 aa22.82■■□□□ 1.24
UPF3A-202ENST00000375299 PODXLO00592 558 aa22.82■■□□□ 1.24
UPF3A-202ENST00000375299 TBX3O15119 743 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms