RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ZNF233A6NK53 670 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 TTI1O43156 1089 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 ATP9AO75110 1047 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 CLSTN1O94985 981 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 FGGP02679 453 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 IRAK1P51617 712 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 JAM2P57087 298 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 SF3A3Q12874 501 aaKnown RBP eCLIP18.53■□□□□ 0.563e-6■□□□□ 10.8
RXRB-201ENST00000374680 PAK2Q13177 524 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 CEP85LQ5SZL2 805 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 MXRA8Q9BRK3 442 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 RANBP17Q9H2T7 1088 aaKnown RBP18.53■□□□□ 0.56
RXRB-201ENST00000374680 TCEAL9Q9UHQ7 104 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 BZW2Q9Y6E2 419 aaKnown RBP18.53■□□□□ 0.56
RXRB-201ENST00000374680 CNTNAP1P78357 1384 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 BRWD3Q6RI45 1802 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 PPP3CAQ08209 521 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 ITGB3BPQ13352 177 aaPredicted RBP18.53■□□□□ 0.56
RXRB-201ENST00000374680 BMT2Q1RMZ1 405 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 ZNF572Q7Z3I7 529 aaPredicted RBP18.53■□□□□ 0.56
RXRB-201ENST00000374680 CPNE8Q86YQ8 564 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 ARHGEF19Q8IW93 802 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 MSL3Q8N5Y2 521 aaKnown RBP18.53■□□□□ 0.56
RXRB-201ENST00000374680 TRIM51Q9BSJ1 452 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 CAPS2Q9BXY5 557 aa18.53■□□□□ 0.56
RXRB-201ENST00000374680 ASTN2O75129 1339 aaPredicted RBP18.52■□□□□ 0.56
RXRB-201ENST00000374680 FERP16591 822 aa18.52■□□□□ 0.56
RXRB-201ENST00000374680 UGCGQ16739 394 aa18.52■□□□□ 0.56
RXRB-201ENST00000374680 FAM102BQ5T8I3 360 aa18.52■□□□□ 0.56
RXRB-201ENST00000374680 MCTP2Q6DN12 878 aa18.52■□□□□ 0.56
RXRB-201ENST00000374680 TTLL6Q8N841 843 aa18.52■□□□□ 0.56
RXRB-201ENST00000374680 BCAS4Q8TDM0 211 aa18.52■□□□□ 0.56
RXRB-201ENST00000374680 CTNNBL1Q8WYA6 563 aaPredicted RBP18.52■□□□□ 0.56
RXRB-201ENST00000374680 GDF3Q9NR23 364 aa18.52■□□□□ 0.56
RXRB-201ENST00000374680 TELO2Q9Y4R8 837 aa18.52■□□□□ 0.56
RXRB-201ENST00000374680 ATRNL1Q5VV63 1379 aa18.52■□□□□ 0.56
RXRB-201ENST00000374680 GUCY1A3Q02108 690 aa18.52■□□□□ 0.55
RXRB-201ENST00000374680 ITIH3Q06033 890 aa18.52■□□□□ 0.55
RXRB-201ENST00000374680 SPP2Q13103 211 aa18.52■□□□□ 0.55
RXRB-201ENST00000374680 BTBD6Q96KE9 485 aa18.52■□□□□ 0.55
RXRB-201ENST00000374680 CTDP1Q9Y5B0 961 aaPredicted RBP18.52■□□□□ 0.55
RXRB-201ENST00000374680 NRXN2Q9P2S2 1712 aa18.52■□□□□ 0.55
RXRB-201ENST00000374680 SLC16A3O15427 465 aaKnown RBP18.51■□□□□ 0.55
RXRB-201ENST00000374680 KRT13P13646 458 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 DPEP1P16444 411 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 MAP2K1Q02750 393 aaPredicted RBP18.51■□□□□ 0.55
RXRB-201ENST00000374680 BFSP1Q12934 665 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 MAPK7Q13164 816 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 RASA3Q14644 834 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 UBLCP1Q8WVY7 318 aaPredicted RBP18.51■□□□□ 0.55
RXRB-201ENST00000374680 PLAAQ9Y263 795 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 PGRMC1O00264 195 aaKnown RBP18.51■□□□□ 0.55
RXRB-201ENST00000374680 OPA1O60313 960 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 FKBP1AP62942 108 aaKnown RBP18.51■□□□□ 0.55
RXRB-201ENST00000374680 SLC15A2Q16348 729 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 GLG1Q92896 1179 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 WNK4Q96J92 1243 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 STK33Q9BYT3 514 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 AMFRQ9UKV5 643 aa18.51■□□□□ 0.55
RXRB-201ENST00000374680 WNT10BO00744 389 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 BACH1O14867 736 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 MRPS9P82933 396 aaKnown RBP18.5■□□□□ 0.55
RXRB-201ENST00000374680 EPC2Q52LR7 807 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 NT5DC3Q86UY8 548 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 PPM1KQ8N3J5 372 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 UHMK1Q8TAS1 419 aaKnown RBP18.5■□□□□ 0.55
RXRB-201ENST00000374680 CTTNBP2NLQ9P2B4 639 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 APEX2Q9UBZ4 518 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 PRKCIP41743 596 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 IFI16Q16666 785 aaKnown RBP18.5■□□□□ 0.55
RXRB-201ENST00000374680 SPDYE2Q495Y8 402 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 XKR9Q5GH70 373 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 SRLQ86TD4 932 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 GPR88Q9GZN0 384 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 TOPORSQ9NS56 1045 aaPredicted RBP18.5■□□□□ 0.55
RXRB-201ENST00000374680 FRMPD4Q14CM0 1322 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
RXRB-201ENST00000374680 RPS6P62753 249 aaKnown RBP18.5■□□□□ 0.55
RXRB-201ENST00000374680 MTMR1Q13613 665 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 EHMT1Q9H9B1 1298 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 RNF14Q9UBS8 474 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 COG5Q9UP83 839 aa18.5■□□□□ 0.55
RXRB-201ENST00000374680 MYH11P35749 1972 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 EIF3DO15371 548 aaKnown RBP eCLIP18.49■□□□□ 0.55
RXRB-201ENST00000374680 FTLP02792 175 aaPredicted RBP18.49■□□□□ 0.55
RXRB-201ENST00000374680 IVLP07476 585 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 MARCKSL1P49006 195 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 CXCL9Q07325 125 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 PPFIA1Q13136 1202 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 MESDQ14696 234 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 ARHGAP27Q6ZUM4 889 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 STXBP4Q6ZWJ1 553 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 PLEKHO2Q8TD55 490 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 PIK3R5Q8WYR1 880 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.49■□□□□ 0.552e-10■■■■□ 25.3
RXRB-201ENST00000374680 LARSQ9P2J5 1176 aaKnown RBP18.49■□□□□ 0.55
RXRB-201ENST00000374680 ZNF536O15090 1300 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 GREB1LQ9C091 1923 aaPredicted RBP18.49■□□□□ 0.55
RXRB-201ENST00000374680 HOXA7P31268 230 aaPredicted RBP18.49■□□□□ 0.55
RXRB-201ENST00000374680 SSTR3P32745 418 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms