RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 R3HDMLQ9H3Y0 253 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 LRRC37A2A6NM11 1700 aa21.39■■□□□ 1.02
HDAC1-201ENST00000373548 POTEB2H3BUK9 544 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 ENC1O14682 589 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 EDNRBP24530 442 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 SOX10P56693 466 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 MOGSQ13724 837 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 CBWD6Q4V339 395 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 CBWD3Q5JTY5 395 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 CBWD5Q5RIA9 395 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 IRF2BP2Q7Z5L9 587 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 TMEM161BQ8NDZ6 487 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 ZNF526Q8TF50 670 aaPredicted RBP21.39■■□□□ 1.01
HDAC1-201ENST00000373548 KIFAP3Q92845 792 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 PDLIM7Q9NR12 457 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 SEPT9Q9UHD8 586 aaPredicted RBP21.39■■□□□ 1.01
HDAC1-201ENST00000373548 MYH10P35580 1976 aa21.39■■□□□ 1.01
HDAC1-201ENST00000373548 CCDC169A6NNP5 214 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 ATP1A1P05023 1023 aaKnown RBP21.38■■□□□ 1.01
HDAC1-201ENST00000373548 JAM2P57087 298 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 DMP1Q13316 513 aaPredicted RBP21.38■■□□□ 1.01
HDAC1-201ENST00000373548 GJB7Q6PEY0 223 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 TRAPPC11Q7Z392 1133 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 CEP112Q8N8E3 955 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 OPTNQ96CV9 577 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 KIFC3Q9BVG8 833 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 MLXIPQ9HAP2 919 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 XPNPEP1Q9NQW7 623 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 SYNGAP1Q96PV0 1343 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 ATG7O95352 703 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 H2AFXP16104 143 aaPredicted RBP21.38■■□□□ 1.01
HDAC1-201ENST00000373548 ENOX2Q16206 610 aaKnown RBP21.38■■□□□ 1.01
HDAC1-201ENST00000373548 WHAMMP3Q1A5X7 153 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 TEX35Q5T0J7 233 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 IQCEQ6IPM2 695 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 TXNRD2Q9NNW7 524 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 CYP26B1Q9NR63 512 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 HSPBP1Q9NZL4 362 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 HDAC6Q9UBN7 1215 aa21.38■■□□□ 1.01
HDAC1-201ENST00000373548 PUF60Q9UHX1 559 aaKnown RBP21.38■■□□□ 1.01
HDAC1-201ENST00000373548 DGAT1O75907 488 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 SMTNP53814 917 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 SNRPFP62306 86 aaKnown RBP21.37■■□□□ 1.01
HDAC1-201ENST00000373548 SLC18A3Q16572 532 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 PAPD7Q5XG87 772 aaKnown RBP21.37■■□□□ 1.01
HDAC1-201ENST00000373548 ZSWIM2Q8NEG5 633 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 SPIRE2Q8WWL2 714 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 NTPCRQ9BSD7 190 aaKnown RBP21.37■■□□□ 1.01
HDAC1-201ENST00000373548 TBX20Q9UMR3 447 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 CAPN6Q9Y6Q1 641 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 A0A087X0T9 212 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 FAM228BP0C875 321 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 CHMP4BP1P59074 171 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 XKR3Q5GH77 459 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 INTS8Q75QN2 995 aaKnown RBP21.37■■□□□ 1.01
HDAC1-201ENST00000373548 MAP4K3Q8IVH8 894 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 XXYLT1Q8NBI6 393 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 GOLGA1Q92805 767 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 HVCN1Q96D96 273 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 C17orf75Q9HAS0 396 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 KMT5AQ9NQR1 393 aa21.37■■□□□ 1.01
HDAC1-201ENST00000373548 SCN4AP35499 1836 aa21.36■■□□□ 1.01
HDAC1-201ENST00000373548 KRT13P13646 458 aa21.36■■□□□ 1.01
HDAC1-201ENST00000373548 ATP4AP20648 1035 aa21.36■■□□□ 1.01
HDAC1-201ENST00000373548 UBA1P22314 1058 aaKnown RBP21.36■■□□□ 1.01
HDAC1-201ENST00000373548 DLG4P78352 724 aa21.36■■□□□ 1.01
HDAC1-201ENST00000373548 MYL7Q01449 175 aa21.36■■□□□ 1.01
HDAC1-201ENST00000373548 PTK2Q05397 1052 aa21.36■■□□□ 1.01
HDAC1-201ENST00000373548 MCPH1Q8NEM0 835 aa21.36■■□□□ 1.01
HDAC1-201ENST00000373548 RBPJLQ9UBG7 517 aa21.36■■□□□ 1.01
HDAC1-201ENST00000373548 SALL4Q9UJQ4 1053 aa21.36■■□□□ 1.01
HDAC1-201ENST00000373548 MAFBQ9Y5Q3 323 aaPredicted RBP21.36■■□□□ 1.01
HDAC1-201ENST00000373548 ANO9A1A5B4 782 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 DENND3A2RUS2 1198 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 MOCS3O95396 460 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 PRKCIP41743 596 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 EAPPQ56P03 285 aaPredicted RBP21.35■■□□□ 1.01
HDAC1-201ENST00000373548 ZNF571Q7Z3V5 609 aaPredicted RBP21.35■■□□□ 1.01
HDAC1-201ENST00000373548 TRIM58Q8NG06 486 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.35■■□□□ 1.01
HDAC1-201ENST00000373548 INTS2Q9H0H0 1204 aaKnown RBP21.35■■□□□ 1.01
HDAC1-201ENST00000373548 EPC1Q9H2F5 836 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 TAF1DQ9H5J8 278 aaPredicted RBP21.35■■□□□ 1.01
HDAC1-201ENST00000373548 ATP6V0A4Q9HBG4 840 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 ZNF302Q9NR11 478 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 ADAMTS1Q9UHI8 967 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 EXOC7Q9UPT5 735 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 GLTPD2A6NH11 291 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 ANKRD63C9JTQ0 380 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 TACC1O75410 805 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 SLC25A27O95847 323 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 VAMP7P51809 220 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 MTERF2Q49AM1 385 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 GPAT2Q6NUI2 795 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 ARMC9Q7Z3E5 817 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 TXLNBQ8N3L3 684 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 ANKRD13CQ8N6S4 541 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 RABGGTAQ92696 567 aa21.35■■□□□ 1.01
HDAC1-201ENST00000373548 BZW2Q9Y6E2 419 aaKnown RBP21.35■■□□□ 1.01
HDAC1-201ENST00000373548 ADGRA3Q8IWK6 1321 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms