RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 ERVK-10P10266 1014 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 PLD3Q8IV08 490 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 DIS3LQ8TF46 1054 aaKnown RBP9.66□□□□□ -0.86
CSMD2-205ENST00000373381 SENP2Q9HC62 589 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 GDAQ9Y2T3 454 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 ZFYVE9O95405 1425 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 MED23Q9ULK4 1368 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 DDIT3P35638 169 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 CCT5P48643 541 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 SEPT2Q15019 361 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 CCT7Q99832 543 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 FHDC1Q9C0D6 1143 aaPredicted RBP9.66□□□□□ -0.86
CSMD2-205ENST00000373381 GRIK1P39086 918 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 FAM47EQ6ZV65 393 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 KIRREL3Q8IZU9 778 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 OR6P1Q8NGX9 317 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 UCMAQ8WVF2 138 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 SPON2Q9BUD6 331 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 HOXC10Q9NYD6 342 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 UBN2Q6ZU65 1347 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 GCP02774 474 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 TSC22D1Q15714 1073 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 BBS7Q8IWZ6 715 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 LEMD3Q9Y2U8 911 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 MAPK13O15264 365 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 ELF2Q15723 593 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 RASSF3Q86WH2 238 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 MYL10Q9BUA6 226 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 NGRNQ9NPE2 291 aaKnown RBP9.66□□□□□ -0.86
CSMD2-205ENST00000373381 INTUQ9ULD6 942 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 RIMS2Q9UQ26 1411 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 ESRRAP11474 423 aaPredicted RBP9.66□□□□□ -0.86
CSMD2-205ENST00000373381 HMOX2P30519 316 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 JAK3P52333 1124 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 ABCE1P61221 599 aaKnown RBP9.66□□□□□ -0.86
CSMD2-205ENST00000373381 TTC23Q5W5X9 447 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 SLC52A2Q9HAB3 445 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 RAD17O75943 681 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 MAPK6Q16659 721 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 DDIASQ8IXT1 998 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 KBTBD3Q8NAB2 608 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 USP17L3A6NCW0 530 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 USP17L4A6NCW7 530 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 hCG_1984214I3L0E3 225 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 PDIA3P30101 505 aaKnown RBP9.66□□□□□ -0.86
CSMD2-205ENST00000373381 SNAP25P60880 206 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 USP17L1Q7RTZ2 530 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 ZNF229Q9UJW7 825 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 UBA6A0AVT1 1052 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 RNASEH1O60930 286 aaKnown RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 ZKSCAN8Q15776 578 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 ZSCAN18Q8TBC5 510 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 AK8Q96MA6 479 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 YEATS2Q9ULM3 1422 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 RUNX1T1Q06455 604 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 CENPTQ96BT3 561 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 CALR3Q96L12 384 aaKnown RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 GINS4Q9BRT9 223 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 GADD45BO75293 160 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 VCAM1P19320 739 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 USP6NLQ92738 828 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 ERVV-2B6SEH9 535 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 HSD17B4P51659 736 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 EZH2Q15910 746 aaKnown RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 MFSD1Q9H3U5 465 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 NEUROD4Q9HD90 331 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 KIAA1468Q9P260 1216 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 TLR2O60603 784 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 OAS2P29728 719 aaKnown RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 CCDC60Q8IWA6 550 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 DDX17Q92841 729 aaKnown RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 RPAP3Q9H6T3 665 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 PI4KBQ9UBF8 816 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 CCDC130P13994 396 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 CHRNA3P32297 505 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 KPNA1P52294 538 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 POU5F1BQ06416 359 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 TCEAL5Q5H9L2 206 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 CAND2O75155 1236 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 ASNSP08243 561 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 SLC16A1P53985 500 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 TMEM132BQ14DG7 1078 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 RARS2Q5T160 578 aaKnown RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 QTRT2Q9H974 415 aaKnown RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 ZMYM6O95789 1325 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 CALB1P05937 261 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 GTF2E2P29084 291 aaKnown RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 MAPRE2Q15555 327 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 FASTKD1Q53R41 847 aaKnown RBP9.65□□□□□ -0.86
CSMD2-205ENST00000373381 DSCC1Q9BVC3 393 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 ZNF341Q9BYN7 854 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 ZWILCHQ9H900 591 aa9.65□□□□□ -0.86
CSMD2-205ENST00000373381 PTPN23Q9H3S7 1636 aa9.65□□□□□ -0.87
CSMD2-205ENST00000373381 ASXL1Q8IXJ9 1541 aa9.65□□□□□ -0.87
CSMD2-205ENST00000373381 PGRMC1O00264 195 aaKnown RBP9.65□□□□□ -0.87
CSMD2-205ENST00000373381 ADRA2BP18089 450 aa9.65□□□□□ -0.87
CSMD2-205ENST00000373381 CHMLP26374 656 aa9.65□□□□□ -0.87
CSMD2-205ENST00000373381 PNOCQ13519 176 aa9.65□□□□□ -0.87
CSMD2-205ENST00000373381 TRADDQ15628 312 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms