RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CTNNBL1Q8WYA6 563 aaPredicted RBP14.81□□□□□ -0.04
USP49-201ENST00000373006 FAM167BQ9BTA0 163 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 IRAK4Q9NWZ3 460 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 SLC12A4Q9UP95 1085 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 TRAF3IP3Q9Y228 551 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 A0A0A6YYK5 440 aaPredicted RBP14.81□□□□□ -0.04
USP49-201ENST00000373006 GOLGA6L10A0A0M3HER8 536 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 KIAA0391O15091 583 aaKnown RBP14.81□□□□□ -0.04
USP49-201ENST00000373006 SLURP2P0DP57 97 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 PLCG2P16885 1265 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 NT5C2P49902 561 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 HYIQ5T013 277 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 CCDC25Q86WR0 208 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 FOXO6A8MYZ6 492 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 ASAP2O43150 1006 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 LGR5O75473 907 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 CALRP27797 417 aaKnown RBP14.81□□□□□ -0.04
USP49-201ENST00000373006 HOXA7P31268 230 aaPredicted RBP14.81□□□□□ -0.04
USP49-201ENST00000373006 CLK2P49760 499 aaKnown RBP14.81□□□□□ -0.04
USP49-201ENST00000373006 ARHGAP44Q17R89 818 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 KSR1Q8IVT5 923 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 PRCCQ92733 491 aaPredicted RBP14.81□□□□□ -0.04
USP49-201ENST00000373006 COG5Q9UP83 839 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 TRPC6Q9Y210 931 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 PTPN22Q9Y2R2 807 aa14.81□□□□□ -0.04
USP49-201ENST00000373006 RPTORQ8N122 1335 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 hCG_1984214I3L0E3 225 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 MPHOSPH10O00566 681 aaKnown RBP14.8□□□□□ -0.04
USP49-201ENST00000373006 UBOX5O94941 541 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 ANP32DO95626 131 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 NUDT17P0C025 328 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 TM4SF1P30408 202 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 DRAP1Q14919 205 aaPredicted RBP14.8□□□□□ -0.04
USP49-201ENST00000373006 KIF2BQ8N4N8 673 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 ZNF713Q8N859 430 aaPredicted RBP14.8□□□□□ -0.04
USP49-201ENST00000373006 RFFLQ8WZ73 363 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 PGM2Q96G03 612 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 CPSF2Q9P2I0 782 aaKnown RBP14.8□□□□□ -0.04
USP49-201ENST00000373006 IRS2Q9Y4H2 1338 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 CALUO43852 315 aaPredicted RBP14.8□□□□□ -0.04
USP49-201ENST00000373006 FERP16591 822 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 RPL21P46778 160 aaKnown RBP14.8□□□□□ -0.04
USP49-201ENST00000373006 MARCKSL1P49006 195 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 ASPRV1Q53RT3 343 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 PRR16Q569H4 304 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 SLC30A5Q8TAD4 765 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 AGAP11Q8TF27 550 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 ASTN1O14525 1302 aa14.8□□□□□ -0.04
USP49-201ENST00000373006 POLD1P28340 1107 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 NPEPPSP55786 919 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 PPATQ06203 517 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 MAPK7Q13164 816 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 CRYMQ14894 314 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 AP1ARQ63HQ0 302 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 AMIGO3Q86WK7 504 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 DYDC1Q8WWB3 177 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 RSRC1Q96IZ7 334 aaKnown RBP14.79□□□□□ -0.04
USP49-201ENST00000373006 DNAJC12Q9UKB3 198 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 DNM3Q9UQ16 869 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 PDXKO00764 312 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 CREB1P16220 341 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 OLIG1Q8TAK6 271 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 KRT35Q92764 455 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 BHMT2Q9H2M3 363 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 GRHL1Q9NZI5 618 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 STK38LQ9Y2H1 464 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 A8MUI8 341 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 LRRN2O75325 713 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 SOX5P35711 763 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 ZNF543Q08ER8 600 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 ITIH4Q14624 930 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 SLC30A10Q6XR72 485 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 ZDHHC14Q8IZN3 488 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 CARD9Q9H257 536 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 TTC7AQ9ULT0 858 aaPredicted RBP14.79□□□□□ -0.04
USP49-201ENST00000373006 ALG6Q9Y672 507 aa14.79□□□□□ -0.04
USP49-201ENST00000373006 RHBDL3P58872 404 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 ZC2HC1CQ53FD0 456 aaPredicted RBP14.78□□□□□ -0.04
USP49-201ENST00000373006 C6orf118Q5T5N4 469 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 TTC27Q6P3X3 843 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 ZCWPW1Q9H0M4 648 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 FGFR1OP2Q9NVK5 253 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 INTUQ9ULD6 942 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 G3BP2Q9UN86 482 aaKnown RBP14.78□□□□□ -0.04
USP49-201ENST00000373006 SPATA31A1Q5TZJ5 1347 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 GPR75-ASB3A0A0A6YYF3 556 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 RASGRF2O14827 1237 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 TMEM253P0C7T8 217 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 TNFAIP3P21580 790 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 KCNJ1P48048 391 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 COG2Q14746 738 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 LONRF1Q17RB8 773 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 BARGINQ6ZT62 677 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 RDH13Q8NBN7 331 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 PITPNM2Q9BZ72 1349 aa14.78□□□□□ -0.04
USP49-201ENST00000373006 TCRBV7S2A1N4TA0A589 114 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 TCP11X1B4DZS4 312 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 ANKRD63C9JTQ0 380 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 TRIM49P0CI25 452 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 TRIM49CP0CI26 452 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms