RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 TESPA1A2RU30 521 aaPredicted RBP16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 TLR3O15455 904 aaKnown RBP16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 MFN2O95140 757 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 FAM81BQ96LP2 452 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 CAND2O75155 1236 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 BRAFP15056 766 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 ZNF18P17022 549 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 CENPPQ6IPU0 288 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 VPS50Q96JG6 964 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 UBE2OQ9C0C9 1292 aaKnown RBP16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 MAGEF1Q9HAY2 307 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 E5RI56 91 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 TRIM24O15164 1050 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 TCN1P20061 433 aaPredicted RBP16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 ITGAXP20702 1163 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 C16orf72Q14CZ0 275 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 XKR9Q5GH70 373 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 KIF2BQ8N4N8 673 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 COG1Q8WTW3 980 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 ZFP42Q96MM3 310 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 MMTAG2Q9BU76 263 aaKnown RBP16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 FAM153AQ9UHL3 310 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 HNRNPDLO14979 420 aaKnown RBP16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 TSR3Q9UJK0 312 aaKnown RBP16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 F8W8V4 182 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 TRIP10Q15642 601 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 PDCD10Q9BUL8 212 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 C20orf96Q9NUD7 363 aaPredicted RBP16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 LMCD1Q9NZU5 365 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 ADGRL1O94910 1474 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 COG2Q14746 738 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 TNNI3KQ59H18 835 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 CCDC60Q8IWA6 550 aaPredicted RBP16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 ANKRD49Q8WVL7 239 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 ULK4Q96C45 1275 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 ADPGKQ9BRR6 497 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 FPGT-TNNI3KV9GXZ4 949 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 SCAF11Q99590 1463 aaKnown RBP16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 RGS12O14924 1447 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 PSMA2P25787 234 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 CASS4Q9NQ75 786 aa16.24■□□□□ 0.19
GTF3C4-201ENST00000372146 FRMPD2Q68DX3 1309 aaPredicted RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 H0YCG3 227 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 COX10Q12887 443 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 DCTN2Q13561 401 aaKnown RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 DHTKD1Q96HY7 919 aaPredicted RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 TRPM8Q7Z2W7 1104 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 UBASH3BQ8TF42 649 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 TTC7AQ9ULT0 858 aaPredicted RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 KIAA1024Q9UPX6 916 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 PIPSLA2A3N6 862 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 IKBKBO14920 756 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 RWDD4Q6NW29 188 aaKnown RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 AGGF1Q8N302 714 aaeCLIP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 CCT8L2Q96SF2 557 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 ADCY9O60503 1353 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 CARMIL3Q8ND23 1372 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 BTN3A3O00478 584 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 EIF3HO15372 352 aaKnown RBP eCLIP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 MAN2A1Q16706 1144 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 DIS3LQ8TF46 1054 aaKnown RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 APPBP2Q92624 585 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 ALG13Q9NP73 1137 aaKnown RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 SLC12A6Q9UHW9 1150 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 FAM32AQ9Y421 112 aaKnown RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 SCG3Q8WXD2 468 aaKnown RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 HSPBP1Q9NZL4 362 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 DIS3Q9Y2L1 958 aaKnown RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 LSM1O15116 133 aaKnown RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 PRPF4O43172 522 aaKnown RBP eCLIP16.23■□□□□ 0.193e-9■■■■■ 30.9
GTF3C4-201ENST00000372146 LAMC2Q13753 1193 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 DNAL1Q4LDG9 190 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 KIFC1Q9BW19 673 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 RPAP3Q9H6T3 665 aaPredicted RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 C19orf44Q9H6X5 657 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 VHLP40337 213 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 MDM1Q8TC05 714 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 FAM162AQ96A26 154 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 ZC3H12CQ9C0D7 883 aaKnown RBP16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 NDUFB9Q9Y6M9 179 aa16.23■□□□□ 0.19
GTF3C4-201ENST00000372146 F5H423 210 aaPredicted RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ENO3P13929 434 aaPredicted RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 TAF8Q7Z7C8 310 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ZNF786Q8N393 782 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 REXO4Q9GZR2 422 aaKnown RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 SARS2Q9NP81 518 aaKnown RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 MAN1B1Q9UKM7 699 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ABCC12Q96J65 1359 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 MAGEA13PA6NCF6 341 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 YWHABP31946 246 aaKnown RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 CYP27A1Q02318 531 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 GPS1Q13098 491 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ARHGEF25Q86VW2 580 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 PSTPIP2Q9H939 334 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 BICRAQ9NZM4 1560 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 FGFR4P22455 802 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 SOX11P35716 441 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms