RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 ATP5DP30049 168 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 FXR2P51116 673 aaKnown RBP eCLIP17.44■□□□□ 0.384e-8■■■■□ 20.2
CHD1L-203ENST00000369259 RBM5P52756 815 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHD1L-203ENST00000369259 POLE2P56282 527 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 MTFR1Q15390 333 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 LONRF1Q17RB8 773 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 WASHC2DQ5SRD0 308 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 INTS8Q75QN2 995 aaKnown RBP17.44■□□□□ 0.38
CHD1L-203ENST00000369259 KCNK18Q7Z418 384 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 ZCRB1Q8TBF4 217 aaKnown RBP17.44■□□□□ 0.38
CHD1L-203ENST00000369259 SH3TC2Q8TF17 1288 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 INPP5DQ92835 1189 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 DNAJC19Q96DA6 116 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 C18orf8Q96DM3 657 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 MYLK2Q9H1R3 596 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 USP40Q9NVE5 1235 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 MYH3P11055 1940 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 A0A1B0GVG6 124 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 PHF2O75151 1096 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 CHRNA3P32297 505 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 PPATQ06203 517 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 ZNF211Q13398 564 aaPredicted RBP17.44■□□□□ 0.38
CHD1L-203ENST00000369259 DYNC1I2Q13409 638 aaKnown RBP17.44■□□□□ 0.38
CHD1L-203ENST00000369259 SETDB1Q15047 1291 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 ARMC3Q5W041 872 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 VSIG1Q86XK7 387 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 SLC35G2Q8TBE7 412 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 FAM81AQ8TBF8 368 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 RBM41Q96IZ5 413 aaKnown RBP17.44■□□□□ 0.38
CHD1L-203ENST00000369259 SERPINB12Q96P63 405 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 MTMR9Q96QG7 549 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 ZCWPW1Q9H0M4 648 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 CTTNBP2NLQ9P2B4 639 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 ARMCX3Q9UH62 379 aaPredicted RBP17.44■□□□□ 0.38
CHD1L-203ENST00000369259 HDAC9Q9UKV0 1011 aa17.44■□□□□ 0.38
CHD1L-203ENST00000369259 PITPNM2Q9BZ72 1349 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 NAPAP54920 295 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 CALCRLQ16602 461 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 MUM1Q2TAK8 710 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 LONP2Q86WA8 852 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 DGKHQ86XP1 1220 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 TBCKQ8TEA7 893 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 SNX29Q8TEQ0 813 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 MAGEB18Q96M61 343 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 FGFBP2Q9BYJ0 223 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 EYA4O95677 639 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 GSTA2P09210 222 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 PON1P27169 355 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 STX2P32856 288 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 PDIA5Q14554 519 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 CHRNA2Q15822 529 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 EXOC3L4Q17RC7 722 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 TMEM119Q4V9L6 283 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 TRMT10CQ7L0Y3 403 aaKnown RBP17.43■□□□□ 0.38
CHD1L-203ENST00000369259 DNAJC10Q8IXB1 793 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 ZC3H3Q8IXZ2 948 aaKnown RBP17.43■□□□□ 0.38
CHD1L-203ENST00000369259 RFFLQ8WZ73 363 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 FGD4Q96M96 766 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 CRAMP1Q96RY5 1269 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 TAOK3Q9H2K8 898 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 PCMTD2Q9NV79 361 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 TBC1D7Q9P0N9 293 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 SEC63Q9UGP8 760 aaKnown RBP17.43■□□□□ 0.38
CHD1L-203ENST00000369259 SCOCQ9UIL1 159 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 PCDHA3Q9Y5H8 950 aa17.43■□□□□ 0.38
CHD1L-203ENST00000369259 NCANO14594 1321 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 PFASO15067 1338 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 SMCO2A6NFE2 343 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 H0Y3Z8 333 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 CETN3O15182 167 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 GH1P01241 217 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 MPP2Q14168 576 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 KRT79Q5XKE5 535 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 SUPT20HQ8NEM7 779 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 NUDT12Q9BQG2 462 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 RAB34Q9BZG1 259 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 KCTD10Q9H3F6 313 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 C6orf50Q9HD87 102 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 PCYOX1Q9UHG3 505 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 CICQ96RK0 1608 aaPredicted RBP17.42■□□□□ 0.38
CHD1L-203ENST00000369259 NVLO15381 856 aaKnown RBP17.42■□□□□ 0.38
CHD1L-203ENST00000369259 CYP2D6P10635 497 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 PLCG2P16885 1265 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 VCAM1P19320 739 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 TARSP26639 723 aaKnown RBP17.42■□□□□ 0.38
CHD1L-203ENST00000369259 GNA11P29992 359 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 RANBP1P43487 201 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 LRRC23Q53EV4 343 aaPredicted RBP17.42■□□□□ 0.38
CHD1L-203ENST00000369259 KLHL23Q8NBE8 558 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 FBXO41Q8TF61 875 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 ART4Q93070 314 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 ERP27Q96DN0 273 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 DTNBP1Q96EV8 351 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 ZNF333Q96JL9 665 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 DCP1AQ9NPI6 582 aaPredicted RBP17.42■□□□□ 0.38
CHD1L-203ENST00000369259 HAO1Q9UJM8 370 aa17.42■□□□□ 0.38
CHD1L-203ENST00000369259 ATAD5Q96QE3 1844 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 PAPPAQ13219 1627 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 POTEMA6NI47 508 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms