RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 BIRC5O15392 142 aa7.55□□□□□ -1.2
SPTA1-201ENST00000368147 YY1P25490 414 aa7.55□□□□□ -1.2
SPTA1-201ENST00000368147 PSMA3P25788 255 aa7.55□□□□□ -1.2
SPTA1-201ENST00000368147 ARHGDIAP52565 204 aa7.55□□□□□ -1.2
SPTA1-201ENST00000368147 PPP2R3CQ969Q6 453 aa7.55□□□□□ -1.2
SPTA1-201ENST00000368147 ZNF274Q96GC6 653 aaPredicted RBP7.55□□□□□ -1.2
SPTA1-201ENST00000368147 KLHL31Q9H511 634 aa7.55□□□□□ -1.2
SPTA1-201ENST00000368147 KLHL14Q9P2G3 628 aa7.55□□□□□ -1.2
SPTA1-201ENST00000368147 RNF123Q5XPI4 1314 aa7.55□□□□□ -1.2
SPTA1-201ENST00000368147 MAPKBP1O60336 1514 aa7.55□□□□□ -1.2
SPTA1-201ENST00000368147 UBA6A0AVT1 1052 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 CIAO1O76071 339 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 EEF1B2P24534 225 aaKnown RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ZNF75DP51815 510 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 MGAT5BQ3V5L5 792 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ERICH1Q86X53 443 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 L3MBTL3Q96JM7 780 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 AIFM3Q96NN9 605 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 TACO1Q9BSH4 297 aaKnown RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 NARFQ9UHQ1 456 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 BAIAP2L1Q9UHR4 511 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ANKARQ7Z5J8 1434 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 NPHP3-ACAD11A0A0J9YXS1 232 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 SGO2Q562F6 1265 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 GALNT17Q6IS24 598 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 BZW1Q7L1Q6 419 aaKnown RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 MUC3BQ9H195 1237 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 GAP43P17677 238 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 NFIXQ14938 502 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ADCK5Q3MIX3 580 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 THOC7Q6I9Y2 204 aaKnown RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ST13P4Q8IZP2 240 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 INTS4Q96HW7 963 aaKnown RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 PPP1R36Q96LQ0 422 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 DNAJC7Q99615 494 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 TMEM206Q9H813 350 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 FANCLQ9NW38 375 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 SAMD9LQ8IVG5 1584 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 M0QYV0 167 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 MAP3K13O43283 966 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ZMYND10O75800 440 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 MOCS3O95396 460 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 S100A9P06702 114 aaKnown RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 DNAJB2P25686 324 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ANKRD40Q6AI12 368 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 SDE2Q6IQ49 451 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 DTNBP1Q96EV8 351 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 MYO3BQ8WXR4 1341 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 PDGFRBP09619 1106 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 MCF2P10911 925 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 IMPG1Q17R60 797 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 LMBRD2Q68DH5 695 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ADCK2Q7Z695 626 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 TMTC1Q8IUR5 882 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 LINC00116Q8NCU8 138 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 DCAF4Q8WV16 495 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 FAF2Q96CS3 445 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ATXN7L3BQ96GX2 97 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 FBXL21Q9UKT6 434 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ALDH1A1P00352 501 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 NCF2P19878 526 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 FCGRTP55899 365 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 YME1L1Q96TA2 773 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 TMEM39BQ9GZU3 492 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 BHMT2Q9H2M3 363 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 KLHL8Q9P2G9 620 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-201ENST00000368147 AXIN2Q9Y2T1 843 aa7.54□□□□□ -1.2
SPTA1-201ENST00000368147 ERVV-1B6SEH8 477 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 RASGRF2O14827 1237 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 SNX2O60749 519 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 GSPT1P15170 499 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 SIX5Q8N196 739 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 CFAP61Q8NHU2 1237 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 OSBP2Q969R2 916 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 NR1H4Q96RI1 486 aaPredicted RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 NUDCD1Q96RS6 583 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 TUBB6Q9BUF5 446 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 KLF15Q9UIH9 416 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 NEDD4P46934 1319 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 AOX1Q06278 1338 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 KITP10721 976 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 PRELPP51888 382 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 C2orf54Q08AI8 447 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 OR9Q1Q8NGQ5 310 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 MAGOHBQ96A72 148 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 C19orf60Q96EN9 201 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 PDCD10Q9BUL8 212 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 MTIF3Q9H2K0 278 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 SYTL2Q9HCH5 934 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 TSKSQ9UJT2 592 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 SPATA31A3Q5VYP0 1347 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 POTEMA6NI47 508 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 THPOP40225 353 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 COPB1P53618 953 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 TCEA2Q15560 299 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 ELF2Q15723 593 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 FOXP4Q8IVH2 680 aaPredicted RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 ZKSCAN4Q969J2 545 aaPredicted RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 TUBGCP2Q9BSJ2 902 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 EDEM3Q9BZQ6 932 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms