RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 IGSF22Q8N9C0 903 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 LINC01599Q8WXQ3 324 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 ZNF689Q96CS4 500 aaPredicted RBP10.99□□□□□ -0.65
CD48-202ENST00000368046 ZNF668Q96K58 619 aaPredicted RBP10.99□□□□□ -0.65
CD48-202ENST00000368046 TGS1Q96RS0 853 aaKnown RBP10.99□□□□□ -0.65
CD48-202ENST00000368046 YME1L1Q96TA2 773 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 ADAM2Q99965 735 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 FDXACB1Q9BRP7 624 aaPredicted RBP10.99□□□□□ -0.65
CD48-202ENST00000368046 RAB34Q9BZG1 259 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 CERS4Q9HA82 394 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 C1orf112Q9NSG2 853 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 A0A087WWV3 80 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 DENND3A2RUS2 1198 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 DGAT1O75907 488 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 ARHGEF15O94989 841 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 POU3F3P20264 500 aaPredicted RBP10.98□□□□□ -0.65
CD48-202ENST00000368046 SYT1P21579 422 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 SARSP49591 514 aaKnown RBP10.98□□□□□ -0.65
CD48-202ENST00000368046 POU5F1BQ06416 359 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 DSC3Q14574 896 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 IL17AQ16552 155 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 NPAS4Q8IUM7 802 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 KSR1Q8IVT5 923 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 FIBCD1Q8N539 461 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 PSPC1Q8WXF1 523 aaKnown RBP10.98□□□□□ -0.65
CD48-202ENST00000368046 ARNTL2Q8WYA1 636 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 TMEM143Q96AN5 459 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 SCLT1Q96NL6 688 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 SAMD11Q96NU1 681 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 MTRQ99707 1265 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 CHST12Q9NRB3 414 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 DBR1Q9UK59 544 aaKnown RBP10.98□□□□□ -0.65
CD48-202ENST00000368046 LRFN2Q9ULH4 789 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 PCDHB7Q9Y5E2 793 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 COL4A3BPQ9Y5P4 624 aa10.98□□□□□ -0.65
CD48-202ENST00000368046 VPS37CA5D8V6 355 aaPredicted RBP10.97□□□□□ -0.65
CD48-202ENST00000368046 C9IYK1 514 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 RFXAPO00287 272 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 MGEA5O60502 916 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 CSDE1O75534 798 aaKnown RBP10.97□□□□□ -0.65
CD48-202ENST00000368046 SRGAP2CP0DJJ0 459 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 IGFBP4P22692 258 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 CCT6AP40227 531 aaKnown RBP10.97□□□□□ -0.65
CD48-202ENST00000368046 ATP2C1P98194 919 aaPredicted RBP10.97□□□□□ -0.65
CD48-202ENST00000368046 LAMTOR4Q0VGL1 99 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 ADGRE1Q14246 886 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 MXD4Q14582 209 aaPredicted RBP10.97□□□□□ -0.65
CD48-202ENST00000368046 EMC2Q15006 297 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 KRT79Q5XKE5 535 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 ARL6IP4Q66PJ3 421 aaKnown RBP10.97□□□□□ -0.65
CD48-202ENST00000368046 HAUS3Q68CZ6 603 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 SRGAP1Q7Z6B7 1085 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 FERMT3Q86UX7 667 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 CCDC43Q96MW1 224 aaKnown RBP10.97□□□□□ -0.65
CD48-202ENST00000368046 ELAC1Q9H777 363 aaKnown RBP10.97□□□□□ -0.65
CD48-202ENST00000368046 IFT122Q9HBG6 1241 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 XPNPEP1Q9NQW7 623 aa10.97□□□□□ -0.65
CD48-202ENST00000368046 BMP15O95972 392 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 PDIA4P13667 645 aaKnown RBP10.96□□□□□ -0.65
CD48-202ENST00000368046 FGFR4P22455 802 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 SFPQP23246 707 aaKnown RBP eCLIP10.96□□□□□ -0.65
CD48-202ENST00000368046 ARL2P36404 184 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 BTG3Q14201 252 aaPredicted RBP10.96□□□□□ -0.65
CD48-202ENST00000368046 ECM1Q16610 540 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 KCTD17Q8N5Z5 321 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 MAFAQ8NHW3 353 aaPredicted RBP10.96□□□□□ -0.65
CD48-202ENST00000368046 SNX29Q8TEQ0 813 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 NLRP4Q96MN2 994 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 C17orf80Q9BSJ5 609 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 RC3H2Q9HBD1 1191 aaKnown RBP10.96□□□□□ -0.65
CD48-202ENST00000368046 ATP6V0A4Q9HBG4 840 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 TMEM161AQ9NX61 479 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 DACT1Q9NYF0 836 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 LMCD1Q9NZU5 365 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 KIAA1024Q9UPX6 916 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 DNM3Q9UQ16 869 aa10.96□□□□□ -0.65
CD48-202ENST00000368046 CHD9Q3L8U1 2897 aa10.96□□□□□ -0.66
CD48-202ENST00000368046 A0A0U1RQF3 1178 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 ARHGEF35A5YM69 484 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 GTPBP6O43824 516 aaPredicted RBP10.95□□□□□ -0.66
CD48-202ENST00000368046 EOMESO95936 686 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 RB1P06400 928 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 CYP11B2P19099 503 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 CDC25AP30304 524 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 BMPR1AP36894 532 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 GRB10Q13322 594 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 TFDP1Q14186 410 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 PCBP1Q15365 356 aaKnown RBP eCLIP10.95□□□□□ -0.66
CD48-202ENST00000368046 EPC2Q52LR7 807 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 CATSPER4Q7RTX7 472 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 SPRED2Q7Z698 418 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 HSCBQ8IWL3 235 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 TMEM192Q8IY95 271 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 RNF149Q8NC42 400 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 MCPH1Q8NEM0 835 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 CLP1Q92989 425 aaKnown RBP10.95□□□□□ -0.66
CD48-202ENST00000368046 TRAIPQ9BWF2 469 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 ZSCAN16Q9H4T2 348 aaPredicted RBP10.95□□□□□ -0.66
CD48-202ENST00000368046 MTUS1Q9ULD2 1270 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 RWDD3Q9Y3V2 267 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms