RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 HAO1Q9UJM8 370 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 RGPD5Q99666 1765 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 TRIM49BA6NDI0 452 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 DDHD2O94830 711 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 FGGP02679 453 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 NFIXQ14938 502 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
PRKN-206ENST00000366898 SLF2Q8IX21 1173 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 AGGF1Q8N302 714 aaeCLIP12.55□□□□□ -0.4
PRKN-206ENST00000366898 MB21D1Q8N884 522 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 LRGUKQ96M69 825 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 KLHL25Q9H0H3 589 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 OLFML3Q9NRN5 406 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 TACC3Q9Y6A5 838 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 WDR19Q8NEZ3 1342 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 RIC1Q4ADV7 1423 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 STMN1P16949 149 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 GNA11P29992 359 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 KCNJ2P63252 427 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 DR1Q01658 176 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 MPP3Q13368 585 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 CNNM4Q6P4Q7 775 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 CABP7Q86V35 215 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 CLEC10AQ8IUN9 316 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 FAXDC2Q96IV6 333 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 TRIM56Q9BRZ2 755 aaKnown RBP12.55□□□□□ -0.4
PRKN-206ENST00000366898 CFLARO15519 480 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 DDAH1O94760 285 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 ACADSP16219 412 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 RAB27AP51159 221 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 CBX3Q13185 183 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
PRKN-206ENST00000366898 MIS18BP1Q6P0N0 1132 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 TRIM67Q6ZTA4 783 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 COA7Q96BR5 231 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 COQ7Q99807 217 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 CHD2O14647 1828 aaKnown RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 IQCA1LA6NCM1 817 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 SLC16A2P36021 539 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 NOP14P78316 857 aaKnown RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 NONOQ15233 471 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRKN-206ENST00000366898 KLC3Q6P597 504 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 ICA1LQ8NDH6 482 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 RASA4BC9J798 803 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 RASA4O43374 803 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRKN-206ENST00000366898 PMS2P54278 862 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 PPP2R5EQ16537 467 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 TMC4Q7Z404 712 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 GFM2Q969S9 779 aaKnown RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 ZBED2Q9BTP6 218 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 DNAI2Q9GZS0 605 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 TMEM60Q9H2L4 133 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 DUSP10Q9Y6W6 482 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 ZNF142P52746 1687 aaPredicted RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 SPATA31A1Q5TZJ5 1347 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 RBM47A0AV96 593 aaKnown RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 ZSCAN5CA6NGD5 496 aaPredicted RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 NDC80O14777 642 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 HLA-DOAP06340 250 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 MARK3P27448 753 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 ARHGAP44Q17R89 818 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 PPP1R15BQ5SWA1 713 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 APLFQ8IW19 511 aaPredicted RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 ZNF512BQ96KM6 892 aaPredicted RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 CCDC68Q9H2F9 335 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 CYP4F11Q9HBI6 524 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 DNAAF2Q9NVR5 837 aaKnown RBP12.54□□□□□ -0.4
PRKN-206ENST00000366898 BCAP29Q9UHQ4 241 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 ZNF229Q9UJW7 825 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 CCPG1Q9ULG6 757 aa12.54□□□□□ -0.4
PRKN-206ENST00000366898 A0A0U1RQJ8 604 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 VEGFAP15692 232 aaPredicted RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 KPNB1Q14974 876 aaKnown RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 C16orf72Q14CZ0 275 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 R3HDM1Q15032 1099 aaKnown RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 KRT79Q5XKE5 535 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 ZNF280CQ8ND82 737 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 FAM81BQ96LP2 452 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 PIGSQ96S52 555 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 MAP3K14Q99558 947 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 XPO1O14980 1071 aaKnown RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 GCLCP48506 637 aaPredicted RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 GFPT1Q06210 699 aaPredicted RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 TSEN2Q8NCE0 465 aaKnown RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 CLIC5Q9NZA1 410 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 STK36Q9NRP7 1315 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 FAM196BA6NMK8 535 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 CCDC159P0C7I6 412 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 CACNB3P54284 484 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 TRPC3Q13507 836 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 MDH1BQ5I0G3 518 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms