RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 DAPK3O43293 454 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 SERPING1P05155 500 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 PDHA1P08559 390 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 IFNAR2P48551 515 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 SMTNP53814 917 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 AMPD3Q01432 767 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 SLC18A3Q16572 532 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 SUPT20HL1Q3ZLR7 823 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 ASPRV1Q53RT3 343 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 UBAP2Q5T6F2 1119 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 SEPT14Q6ZU15 432 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 YTHDF3Q7Z739 585 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 ZNF668Q96K58 619 aaPredicted RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 AGBL1Q96MI9 1066 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 NUCKS1Q9H1E3 243 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 DDX25Q9UHL0 483 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 NOVA2Q9UNW9 492 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 NR2E1Q9Y466 385 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 GMNCA6NCL1 334 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 SFI1A8K8P3 1242 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 GCOM1H8Y6P7 765 aaPredicted RBP9.85□□□□□ -0.83
TOP1-201ENST00000361337 TRAPPC3O43617 180 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 UPP2O95045 317 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 MYZAPP0CAP1 466 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 COPB2P35606 906 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 STAT3P40763 770 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 PTK2Q05397 1052 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 SEMA3FQ13275 785 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 KRT25Q7Z3Z0 450 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 WHAMMQ8TF30 809 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 FAM151AQ8WW52 585 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 RAPGEF5Q92565 580 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 ANKS1AQ92625 1134 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 SLC10A4Q96EP9 437 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 MTMR9Q96QG7 549 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 MAGEF1Q9HAY2 307 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 PLCB1Q9NQ66 1216 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 CEP72Q9P209 647 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 ABT1Q9ULW3 272 aaKnown RBP9.85□□□□□ -0.83
TOP1-201ENST00000361337 SART1O43290 800 aaKnown RBP9.85□□□□□ -0.83
TOP1-201ENST00000361337 PSEN1P49768 467 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 MAGOHP61326 146 aaKnown RBP9.85□□□□□ -0.83
TOP1-201ENST00000361337 KLHL30Q0D2K2 578 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 PABPC4Q13310 644 aaKnown RBP eCLIP9.85□□□□□ -0.83
TOP1-201ENST00000361337 ZCWPW2Q504Y3 356 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 FBF1Q8TES7 1133 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 CNKSR2Q8WXI2 1034 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 MAGOHBQ96A72 148 aaKnown RBP9.85□□□□□ -0.83
TOP1-201ENST00000361337 ISCUQ9H1K1 167 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 SEPT11Q9NVA2 429 aaKnown RBP9.85□□□□□ -0.83
TOP1-201ENST00000361337 COL4A3BPQ9Y5P4 624 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 PPP1R12AO14974 1030 aaPredicted RBP9.85□□□□□ -0.83
TOP1-201ENST00000361337 COBLL1Q53SF7 1204 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 CYB5D1Q6P9G0 228 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 ZNF571Q7Z3V5 609 aaPredicted RBP9.85□□□□□ -0.83
TOP1-201ENST00000361337 FUKQ8N0W3 1084 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 RAD54LQ92698 747 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 SEC16BQ96JE7 1060 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 PPP1R16BQ96T49 567 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 DPH5Q9H2P9 285 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 FAM114A2Q9NRY5 505 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 AJAP1Q9UKB5 411 aaPredicted RBP9.85□□□□□ -0.83
TOP1-201ENST00000361337 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
TOP1-201ENST00000361337 POLR2MP0CAP2 368 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ZBTB48P10074 688 aaPredicted RBP9.84□□□□□ -0.83
TOP1-201ENST00000361337 SLC9A1P19634 815 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 COASYQ13057 564 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ANKRD20A8PQ5CZ79 823 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ZFYVE27Q5T4F4 411 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ARHGEF16Q5VV41 709 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 METTL13Q8N6R0 699 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 DNAJC19Q96DA6 116 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 BCAS3Q9H6U6 928 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 MCM8Q9UJA3 840 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 MYO3BQ8WXR4 1341 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ZNF541Q9H0D2 1346 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 TTI1O43156 1089 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ERFP50548 548 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 LRRC63Q05C16 580 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ZNF543Q08ER8 600 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 RPS6KA1Q15418 735 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 HERC4Q5GLZ8 1057 aaPredicted RBP9.84□□□□□ -0.83
TOP1-201ENST00000361337 PPP4R3AQ6IN85 833 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ADAT2Q7Z6V5 191 aaKnown RBP9.84□□□□□ -0.83
TOP1-201ENST00000361337 SYCP3Q8IZU3 236 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 SCFD2Q8WU76 684 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 VTI1AQ96AJ9 217 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 RPAP3Q9H6T3 665 aaPredicted RBP9.84□□□□□ -0.83
TOP1-201ENST00000361337 TSKSQ9UJT2 592 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 KIAA1024Q9UPX6 916 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 A6NNZ2 444 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ZBTB5O15062 677 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 TUBB8Q3ZCM7 444 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 PIGOQ8TEQ8 1089 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 LZTS2Q9BRK4 669 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 TRIM51Q9BSJ1 452 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 ZCWPW1Q9H0M4 648 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 JMJD4Q9H9V9 463 aa9.84□□□□□ -0.83
TOP1-201ENST00000361337 NOC2LQ9Y3T9 749 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms