RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 SMC1AQ14683 1233 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 WHAMMP3Q1A5X7 153 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 CENPPQ6IPU0 288 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 TTI2Q6NXR4 508 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 STXBP4Q6ZWJ1 553 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 MAEAQ7L5Y9 396 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 TRIM50Q86XT4 487 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 FAM114A1Q8IWE2 563 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 SEPT1Q8WYJ6 367 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 EPC1Q9H2F5 836 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 SEMA6BQ9H3T3 888 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 THAP9Q9H5L6 903 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 OLFML3Q9NRN5 406 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 SEPT9Q9UHD8 586 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 TNPO2O14787 897 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 USO1O60763 962 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 ARHGAP1Q07960 439 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 XKR3Q5GH77 459 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 ANKRD40Q6AI12 368 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 CEP170P1Q96L14 293 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 FIZ1Q96SL8 496 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 AZI2Q9H6S1 392 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 CALCOCO1Q9P1Z2 691 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 KAT6AQ92794 2004 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 A0A1W2PQC6 194 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 HIP1RO75146 1068 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 ACVR2BQ13705 512 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 FOXR2Q6PJQ5 311 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 SLC35F6Q8N357 371 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 MSL3Q8N5Y2 521 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 SCFD1Q8WVM8 642 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 EEF2KMTQ96G04 330 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 DRC1Q96MC2 740 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 SPATA33Q96N06 139 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 DUSP9Q99956 384 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 FUT8Q9BYC5 575 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 GBP3Q9H0R5 595 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 GPRC5CQ9NQ84 441 aa14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 LARSQ9P2J5 1176 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-201ENST00000360718 CTAGE15A4D2H0 777 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 POLR3GO15318 223 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 GCNT3O95395 438 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 IGHA2P01877 340 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 CTAGE8P0CG41 777 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 SMPD1P17405 629 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 VEGFBP49765 207 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 ZNF131P52739 623 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 SOX10P56693 466 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 LACTBP83111 547 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 LONRF2Q1L5Z9 754 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 ODR4Q5SWX8 454 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 CTAGE6Q86UF2 777 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 CTAGE4Q8IX94 777 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 FAM178BQ8IXR5 827 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 MSANTD4Q8NCY6 345 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 OR8K1Q8NGG5 319 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 ABHD16BQ9H3Z7 469 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 PUF60Q9UHX1 559 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 SASH3O75995 380 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 MYBP10242 640 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 OAS2P29728 719 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 HOXD13P35453 343 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 PSMC4P43686 418 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 STAT5BP51692 787 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 IRF2BP1Q8IU81 584 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 ACRBPQ8NEB7 543 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 NRBP2Q9NSY0 501 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 RAB21Q9UL25 225 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 GABRQQ9UN88 632 aa14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 LUC7L2Q9Y383 392 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 EPN1Q9Y6I3 576 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-201ENST00000360718 OATP04181 439 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 NMT1P30419 496 aaKnown RBP14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 KCNA1Q09470 495 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 EPM2AIP1Q7L775 607 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 HDXQ7Z353 690 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 NELFCDQ8IXH7 590 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 AFAP1L1Q8TED9 768 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 CEP89Q96ST8 783 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 HAUS4Q9H6D7 363 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 CEP350Q5VT06 3117 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 LGALS16A8MUM7 142 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 EIF3DO15371 548 aaKnown RBP eCLIP14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 LGR5O75473 907 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 DGAT1O75907 488 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 DNM2P50570 870 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 LAMC2Q13753 1193 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 PPP4R3CPQ6ZMV5 832 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 TXLNBQ8N3L3 684 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 MCPH1Q8NEM0 835 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 SOCS4Q8WXH5 440 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 GLG1Q92896 1179 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 LENG1Q96BZ8 264 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 FAM167AQ96KS9 214 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 APBA2Q99767 749 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 NUP58Q9BVL2 599 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 IKZF4Q9H2S9 585 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 XPNPEP1Q9NQW7 623 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms