RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PPP2R3AQ06190 1150 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 STRA8Q7Z7C7 330 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 TEX11Q8IYF3 940 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 EXOC8Q8IYI6 725 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 GPR161Q8N6U8 529 aaKnown RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 ANKRD20A12PQ8NF67 263 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 CCDC12Q8WUD4 166 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 WDR89Q96FK6 387 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 CPVLQ9H3G5 476 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 RIOX1Q9H6W3 641 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 LZTFL1Q9NQ48 299 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 POLLQ9UGP5 575 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 GGA1Q9UJY5 639 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 FOCADQ5VW36 1801 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 LTBP1Q14766 1721 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 A0A1W2PQC6 194 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 SMCO2A6NFE2 343 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 BBOX1O75936 387 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 EEF1GP26641 437 aaKnown RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 GNA11P29992 359 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 HOXA10P31260 410 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 ORC2Q13416 577 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 UBAP2LQ14157 1087 aaKnown RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 TTI2Q6NXR4 508 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 VN1R5Q7Z5H4 357 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 FAM178BQ8IXR5 827 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 MB21D1Q8N884 522 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 PMM1Q92871 262 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 GTPBP3Q969Y2 492 aaKnown RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 RBM17Q96I25 401 aaKnown RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 C6orf50Q9HD87 102 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 STRIP2Q9ULQ0 834 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 PLIN4Q96Q06 1357 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 UBR3Q6ZT12 1888 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 ESYT2A0FGR8 921 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 PRAMEF27A3QJZ7 478 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 TPD52L2O43399 206 aaKnown RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 TP53P04637 393 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 OR52Z1P0C646 297 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 ARHGAP25P42331 645 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 NAPAP54920 295 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 TBX4P57082 545 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 NONOQ15233 471 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 DBN1Q16643 649 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 TXNRD1Q16881 649 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 WIPI1Q5MNZ9 446 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 CYP26C1Q6V0L0 522 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 TBC1D16Q8TBP0 767 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 MKL1Q969V6 931 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 RRP36Q96EU6 259 aaKnown RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 DHTKD1Q96HY7 919 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 PSMD1Q99460 953 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 C7orf25Q9BPX7 421 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 CRISPLD1Q9H336 500 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 METTL14Q9HCE5 456 aaKnown RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 MYH1P12882 1939 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 KLRG2A4D1S0 409 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 LGALS16A8MUM7 142 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 KIF5CO60282 957 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 CCNT1O60563 726 aaKnown RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 SERPINB2P05120 415 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 PNMA6AP0CW24 399 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 PLCG1P19174 1290 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 UBXN1Q04323 297 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 BRDTQ58F21 947 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 MFSD14BQ5SR56 506 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 NEK8Q86SG6 692 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 CABP7Q86V35 215 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 TBC1D22AQ8WUA7 517 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 RABGGTAQ92696 567 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 ZBTB9Q96C00 473 aa8.11□□□□□ -1.11
CLCN3-202ENST00000360642 NUP88Q99567 741 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 MMTAG2Q9BU76 263 aaKnown RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 ARGLU1Q9NWB6 273 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-202ENST00000360642 TBX1O43435 398 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 ATP8B1O43520 1251 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 EDIL3O43854 480 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 EPHA1P21709 976 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 GABPAQ06546 454 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 FXNQ16595 210 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 COBLL1Q53SF7 1204 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 ACRBPQ8NEB7 543 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 NOC3LQ8WTT2 800 aaKnown RBP8.1□□□□□ -1.11
CLCN3-202ENST00000360642 PLPPR2Q96GM1 343 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 MTMR9Q96QG7 549 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 PIGSQ96S52 555 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 PLIN2Q99541 437 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 TRIM9Q9C026 710 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 EPC1Q9H2F5 836 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 CLEC4MQ9H2X3 399 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-202ENST00000360642 LRRC37AA6NMS7 1700 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 MYH8P13535 1937 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 IGKV6D-41A0A0C4DH26 115 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 TTC26A0AVF1 554 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 hCG_1984214I3L0E3 225 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 PSMA7O14818 248 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 SNHG28P0DPA3 235 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 PDHBP11177 359 aa8.1□□□□□ -1.11
CLCN3-202ENST00000360642 KRT9P35527 623 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms