RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 EMSYQ7Z589 1322 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 WDR64B1ANS9 1081 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 MARK3P27448 753 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 RBBP5Q15291 538 aaKnown RBP14.69□□□□□ -0.06
VCP-201ENST00000358901 SLFN12LQ6IEE8 588 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 MCPH1Q8NEM0 835 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 CHMP6Q96FZ7 201 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 CFAP36Q96G28 342 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 HEXIM2Q96MH2 286 aaKnown RBP14.69□□□□□ -0.06
VCP-201ENST00000358901 ABCB11O95342 1321 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 PPP1R3GB7ZBB8 358 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 SOX5P35711 763 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 KLK7P49862 253 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 PPP6R3Q5H9R7 873 aaPredicted RBP14.69□□□□□ -0.06
VCP-201ENST00000358901 FRMD5Q7Z6J6 570 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 ZNF34Q8IZ26 560 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 LXNQ9BS40 222 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 VCX3AQ9NNX9 186 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 RBM12Q9NTZ6 932 aaKnown RBP14.69□□□□□ -0.06
VCP-201ENST00000358901 FAM187AA6NFU0 413 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 SKIP12755 728 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 ABCD1P33897 745 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 QARSP47897 775 aaKnown RBP14.69□□□□□ -0.06
VCP-201ENST00000358901 PODNQ7Z5L7 613 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 C1orf54Q8WWF1 131 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 PDXKO00764 312 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 ZBTB22O15209 634 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 CLDN3O15551 220 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 P4HBP07237 508 aaKnown RBP14.68□□□□□ -0.06
VCP-201ENST00000358901 TROAPQ12815 778 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 NBPF9Q3BBW0 867 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 EAPPQ56P03 285 aaPredicted RBP14.68□□□□□ -0.06
VCP-201ENST00000358901 EPM2AIP1Q7L775 607 aaPredicted RBP14.68□□□□□ -0.06
VCP-201ENST00000358901 RBM41Q96IZ5 413 aaKnown RBP14.68□□□□□ -0.06
VCP-201ENST00000358901 SH2D3AQ9BRG2 576 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 CCDC68Q9H2F9 335 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 MTMR4Q9NYA4 1195 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 IQANK1A0A1B0GTG1 560 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 UCHL3P15374 230 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 ZNF18P17022 549 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 HSPH1Q92598 858 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 RAVER2Q9HCJ3 691 aaKnown RBP14.68□□□□□ -0.06
VCP-201ENST00000358901 PSMD14O00487 310 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 TTI1O43156 1089 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 KRT37O76014 449 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 GALCP54803 685 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 ARL4CP56559 192 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 GPSM2P81274 684 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 SBK1Q52WX2 424 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 KRT39Q6A163 491 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 HDAC11Q96DB2 347 aa14.68□□□□□ -0.06
VCP-201ENST00000358901 ZNF667Q5HYK9 610 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 RSRC2Q7L4I2 434 aaKnown RBP14.67□□□□□ -0.06
VCP-201ENST00000358901 SYT2Q8N9I0 419 aaPredicted RBP14.67□□□□□ -0.06
VCP-201ENST00000358901 TRIM55Q9BYV6 548 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 TLK1Q9UKI8 766 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 CNTNAP5Q8WYK1 1306 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 DCTN3O75935 186 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 BAG6P46379 1132 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 JAK3P52333 1124 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 TMPRSS15P98073 1019 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 PPWD1Q96BP3 646 aaKnown RBP14.67□□□□□ -0.06
VCP-201ENST00000358901 MASTLQ96GX5 879 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 TUBB6Q9BUF5 446 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 TBC1D22BQ9NU19 505 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 PPARGC1AQ9UBK2 798 aaKnown RBP14.67□□□□□ -0.06
VCP-201ENST00000358901 DCTN4Q9UJW0 460 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 XPOTO43592 962 aaKnown RBP14.67□□□□□ -0.06
VCP-201ENST00000358901 LDHAP00338 332 aaKnown RBP14.67□□□□□ -0.06
VCP-201ENST00000358901 CARSP49589 748 aaKnown RBP14.67□□□□□ -0.06
VCP-201ENST00000358901 ZNF543Q08ER8 600 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 NLRP7Q8WX94 980 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 TRIM4Q9C037 500 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 SPATS2LQ9NUQ6 558 aaKnown RBP14.67□□□□□ -0.06
VCP-201ENST00000358901 HPCAL4Q9UM19 191 aa14.67□□□□□ -0.06
VCP-201ENST00000358901 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.67□□□□□ -0.06
VCP-201ENST00000358901 SLC9A1P19634 815 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 NCF2P19878 526 aaPredicted RBP14.66□□□□□ -0.06
VCP-201ENST00000358901 HAUS6Q7Z4H7 955 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 CYTH2Q99418 400 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 SNX25Q9H3E2 840 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 RPF1Q9H9Y2 349 aaKnown RBP14.66□□□□□ -0.06
VCP-201ENST00000358901 LRRC4Q9HBW1 653 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 SCOCQ9UIL1 159 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 HPSEQ9Y251 543 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 C21orf2O43822 256 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 EYA4O95677 639 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 NFIXQ14938 502 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 JADE1Q6IE81 842 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 HIPK4Q8NE63 616 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 FAF2Q96CS3 445 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 CCT8L2Q96SF2 557 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 HAUS2Q9NVX0 235 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 COPEO14579 308 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 GYG2O15488 501 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 MEFVO15553 781 aaPredicted RBP14.66□□□□□ -0.06
VCP-201ENST00000358901 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
VCP-201ENST00000358901 MDH1P40925 334 aaKnown RBP14.66□□□□□ -0.06
VCP-201ENST00000358901 PDE1CQ14123 709 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms