RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 GHRHRQ02643 423 aa17.23■□□□□ 0.35
PHTF1-201ENST00000357783 GLE1Q53GS7 698 aaKnown RBP17.23■□□□□ 0.35
PHTF1-201ENST00000357783 SAMD7Q7Z3H4 446 aa17.23■□□□□ 0.35
PHTF1-201ENST00000357783 RMDN3Q96TC7 470 aa17.23■□□□□ 0.35
PHTF1-201ENST00000357783 GPRC5CQ9NQ84 441 aa17.23■□□□□ 0.35
PHTF1-201ENST00000357783 PSD3Q9NYI0 1048 aa17.23■□□□□ 0.35
PHTF1-201ENST00000357783 ESYT3A0FGR9 886 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
PHTF1-201ENST00000357783 BACH1O14867 736 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 CTNND1O60716 968 aaKnown RBP17.22■□□□□ 0.35
PHTF1-201ENST00000357783 ATP9AO75110 1047 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 LRRN2O75325 713 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 PLS3P13797 630 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 GALCP54803 685 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 OLIG1Q8TAK6 271 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 WNK4Q96J92 1243 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 TRERF1Q96PN7 1200 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 ACCSQ96QU6 501 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 GOLGA6BA6NDN3 693 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 HEXIM1O94992 359 aaKnown RBP17.22■□□□□ 0.35
PHTF1-201ENST00000357783 EPHB4P54760 987 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 GUCY2DQ02846 1103 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 DALRD3Q5D0E6 543 aaKnown RBP17.22■□□□□ 0.35
PHTF1-201ENST00000357783 PLA2G4FQ68DD2 849 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 ZSWIM2Q8NEG5 633 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 TBC1D22BQ9NU19 505 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 EMSYQ7Z589 1322 aa17.22■□□□□ 0.35
PHTF1-201ENST00000357783 TESPA1A2RU30 521 aaPredicted RBP17.21■□□□□ 0.35
PHTF1-201ENST00000357783 AGPSO00116 658 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 CEP104O60308 925 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 ZBED4O75132 1171 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 ZNF280AP59817 542 aaPredicted RBP17.21■□□□□ 0.35
PHTF1-201ENST00000357783 PHLDB3Q6NSJ2 640 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 KLHL7Q8IXQ5 586 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 SLC30A5Q8TAD4 765 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 TMEM206Q9H813 350 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 SEPT11Q9NVA2 429 aaKnown RBP17.21■□□□□ 0.35
PHTF1-201ENST00000357783 LMNB1P20700 586 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 BAG6P46379 1132 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 SF3B2Q13435 895 aaKnown RBP17.21■□□□□ 0.35
PHTF1-201ENST00000357783 NBPF12Q5TAG4 269 aaPredicted RBP17.21■□□□□ 0.35
PHTF1-201ENST00000357783 ARHGEF16Q5VV41 709 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.21■□□□□ 0.35
PHTF1-201ENST00000357783 PEX26Q7Z412 305 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 PDCD2LQ9BRP1 358 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 EPB41L5Q9HCM4 733 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 PXMP2Q9NR77 195 aa17.21■□□□□ 0.35
PHTF1-201ENST00000357783 SLC16A4O15374 487 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 ZBTB7AO95365 584 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 CCNE2O96020 404 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 ABCB4P21439 1286 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 CARSP49589 748 aaKnown RBP17.2■□□□□ 0.34
PHTF1-201ENST00000357783 NPEPPSP55786 919 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 PEX3P56589 373 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 HAUS6Q7Z4H7 955 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 DAAM2Q86T65 1068 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 IFT20Q8IY31 132 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 IFT81Q8WYA0 676 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
PHTF1-201ENST00000357783 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 INTUQ9ULD6 942 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 NFKBIEO00221 500 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 LYPLA2O95372 231 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 TNFRSF8P28908 595 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 GCLMP48507 274 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 VAMP7P51809 220 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 PPP3CAQ08209 521 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 ALCAMQ13740 583 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 MYBPC2Q14324 1141 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 FAM102BQ5T8I3 360 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 EMBQ6PCB8 327 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 INTS8Q75QN2 995 aaKnown RBP17.2■□□□□ 0.34
PHTF1-201ENST00000357783 TSEN2Q8NCE0 465 aaKnown RBP17.2■□□□□ 0.34
PHTF1-201ENST00000357783 HSPBP1Q9NZL4 362 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 RIPK3Q9Y572 518 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 A0A0A6YYK5 440 aaPredicted RBP17.2■□□□□ 0.34
PHTF1-201ENST00000357783 FOXN3O00409 490 aaPredicted RBP17.2■□□□□ 0.34
PHTF1-201ENST00000357783 VWA5AO00534 786 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 MAPTP10636 758 aaKnown RBP17.2■□□□□ 0.34
PHTF1-201ENST00000357783 CAPN2P17655 700 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 GMPSP49915 693 aaPredicted RBP17.2■□□□□ 0.34
PHTF1-201ENST00000357783 XKR9Q5GH70 373 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 METTL13Q8N6R0 699 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 LMO3Q8TAP4 145 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 SLC16A10Q8TF71 515 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 PBKQ96KB5 322 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 OSGEPQ9NPF4 335 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 GDF3Q9NR23 364 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 RNF146Q9NTX7 359 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 NFU1Q9UMS0 254 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 GJA3Q9Y6H8 435 aa17.2■□□□□ 0.34
PHTF1-201ENST00000357783 ATP8B3O60423 1300 aa17.19■□□□□ 0.34
PHTF1-201ENST00000357783 HNRNPH2P55795 449 aaKnown RBP17.19■□□□□ 0.34
PHTF1-201ENST00000357783 PSMC5P62195 406 aa17.19■□□□□ 0.34
PHTF1-201ENST00000357783 TNNC1P63316 161 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms