RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 ACSL3O95573 720 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 ATP2A2P16615 1042 aaKnown RBP8.29□□□□□ -1.08
CD46-204ENST00000357714 MSH2P43246 934 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 LONRF1Q17RB8 773 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 DPY19L2P1Q6NXN4 242 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 GDAP1Q8TB36 358 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 WDR66Q8TBY9 1149 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 SLC35C1Q96A29 364 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 ARHGEF26Q96DR7 871 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 ZBTB10Q96DT7 871 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 NLRP3Q96P20 1036 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 THAP2Q9H0W7 228 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 PNMA3Q9UL41 463 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 TRAF3IP3Q9Y228 551 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
CD46-204ENST00000357714 DLEC1Q9Y238 1755 aa8.29□□□□□ -1.08
CD46-204ENST00000357714 PODXLO00592 558 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 KIF3CO14782 793 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 RIPK2O43353 540 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 RAD21O60216 631 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 PHF2O75151 1096 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 AP1G2O75843 785 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 CHRNA3P32297 505 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 GBP1P32455 592 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 SOX5P35711 763 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 CALCOCO2Q13137 446 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 DRAP1Q14919 205 aaPredicted RBP8.28□□□□□ -1.08
CD46-204ENST00000357714 ARHGAP44Q17R89 818 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 TRIM68Q6AZZ1 485 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 CCDC137Q6PK04 289 aaKnown RBP8.28□□□□□ -1.08
CD46-204ENST00000357714 BTNL9Q6UXG8 535 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 SPATA21Q7Z572 469 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 EXOC3L1Q86VI1 746 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 UBL4BQ8N7F7 174 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 TRIM7Q9C029 511 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 YIPF3Q9GZM5 350 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 CCDC134Q9H6E4 229 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 PSTPIP2Q9H939 334 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 SIX2Q9NPC8 291 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 GRHL1Q9NZI5 618 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ANKIB1Q9P2G1 1089 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 DNAJC12Q9UKB3 198 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 TRIM33Q9UPN9 1127 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 TOGARAM1Q9Y4F4 1720 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ANKRD36CQ5JPF3 1778 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 PDXKO00764 312 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
CD46-204ENST00000357714 MED24O75448 989 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 RFC4P35249 363 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 BTDP43251 543 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 DRG2P55039 364 aaKnown RBP8.28□□□□□ -1.08
CD46-204ENST00000357714 JAM2P57087 298 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ITPK1Q13572 414 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 LLGL1Q15334 1064 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 TAF11Q15544 211 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 CLUL1Q15846 466 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 C11orf91Q3C1V1 193 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ARSHQ5FYA8 562 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ANKRD20A2Q5SQ80 823 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 SEL1L2Q5TEA6 688 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ANKRD20A1Q5TYW2 823 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ANKRD20A3Q5VUR7 823 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 PARD3BQ8TEW8 1205 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ZNF526Q8TF50 670 aaPredicted RBP8.28□□□□□ -1.08
CD46-204ENST00000357714 RUNDC3BQ96NL0 473 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 KLHL14Q9P2G3 628 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 DNM3Q9UQ16 869 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ARL2BPQ9Y2Y0 163 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ALG6Q9Y672 507 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ROBO3Q96MS0 1386 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 SYNGAP1Q96PV0 1343 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 HIP1RO75146 1068 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 LRRN2O75325 713 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 RARGP13631 454 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 STX2P32856 288 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 PPATQ06203 517 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ADCY1Q08828 1119 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 BNIP1Q12981 228 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 GRIK3Q13003 919 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
CD46-204ENST00000357714 GRIK5Q16478 980 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 C16orf86Q6ZW13 317 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 MAEAQ7L5Y9 396 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ZC3H3Q8IXZ2 948 aaKnown RBP8.28□□□□□ -1.08
CD46-204ENST00000357714 PRELID2Q8N945 189 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 REEP2Q9BRK0 252 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 MXD3Q9BW11 206 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 ETNK1Q9HBU6 452 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 KCNMB3Q9NPA1 279 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 TYW1Q9NV66 732 aaKnown RBP8.28□□□□□ -1.08
CD46-204ENST00000357714 TAS2R14Q9NYV8 317 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 NENFQ9UMX5 172 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 THRAP3Q9Y2W1 955 aaKnown RBP8.28□□□□□ -1.08
CD46-204ENST00000357714 A0A1B0GUL6 1792 aa8.28□□□□□ -1.08
CD46-204ENST00000357714 RREB1Q92766 1687 aa8.27□□□□□ -1.08
CD46-204ENST00000357714 MYH1P12882 1939 aa8.27□□□□□ -1.08
CD46-204ENST00000357714 MYH4Q9Y623 1939 aa8.27□□□□□ -1.08
CD46-204ENST00000357714 PITPNM2Q9BZ72 1349 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 USP17L15C9J2P7 530 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 USP17L13C9JLJ4 530 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms