RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 DBNDD1Q9H9R9 158 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 ARHGEF3Q9NR81 526 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 IL17RBQ9NRM6 502 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 BMP2KQ9NSY1 1161 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-205ENST00000357568 AMFRQ9UKV5 643 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 MYO3BQ8WXR4 1341 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 RGS16O15492 202 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-205ENST00000357568 PPP1R12BO60237 982 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-205ENST00000357568 RARAP10276 462 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 DNA2P51530 1060 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 CCDC65Q8IXS2 484 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 AGAP11Q8TF27 550 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 NT5C3AQ9H0P0 336 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 USP15Q9Y4E8 981 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-205ENST00000357568 PCDHA2Q9Y5H9 948 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 SCN9AQ15858 1988 aa11.52□□□□□ -0.56
CAPN3-205ENST00000357568 GTPBP10A4D1E9 387 aaKnown RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 USP17L3A6NCW0 530 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 USP17L4A6NCW7 530 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 SMCO2A6NFE2 343 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 YDJCA8MPS7 323 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 SUN1O94901 812 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 GJB6O95452 261 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 GGPS1O95749 300 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 FERP16591 822 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 RNASE9P60153 205 aaKnown RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 TFAP4Q01664 338 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 C12orf60Q5U649 245 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 CIAPIN1Q6FI81 312 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 CAPRIN2Q6IMN6 1127 aaKnown RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 MIS18BP1Q6P0N0 1132 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 USP17L1Q7RTZ2 530 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 WDR66Q8TBY9 1149 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 TBCKQ8TEA7 893 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 NAP1L4Q99733 375 aaKnown RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 KCTD10Q9H3F6 313 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 SUGT1Q9Y2Z0 365 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 FRMD3A2A2Y4 597 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 POTEFA5A3E0 1075 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 PODXLO00592 558 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 CETN3O15182 167 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 CLTAP09496 248 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 POTEJP0CG39 1038 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 GCKP35557 465 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 EPS15P42566 896 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 CCNHP51946 323 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 HADHBP55084 474 aaKnown RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 JAM2P57087 298 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 COPS2P61201 443 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 SARNPP82979 210 aaKnown RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 DR1Q01658 176 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 TCEAL1Q15170 157 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 NAIF1Q69YI7 327 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 PPP1R18Q6NYC8 613 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 REXO1Q8N1G1 1221 aaKnown RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 MDM1Q8TC05 714 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 ZNF570Q96NI8 536 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 PANK4Q9NVE7 773 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 MTRF1LQ9UGC7 380 aaKnown RBP11.52□□□□□ -0.57
CAPN3-205ENST00000357568 ATP8A1Q9Y2Q0 1164 aa11.52□□□□□ -0.57
CAPN3-205ENST00000357568 PITPNM2Q9BZ72 1349 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 A6NHS1 94 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 RPSAP08865 295 aaKnown RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 VIL1P09327 827 aaKnown RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 TMEM253P0C7T8 217 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 ITGA4P13612 1032 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 UCHL3P15374 230 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 ATP5DP30049 168 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 LACTBP83111 547 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 CNGA2Q16280 664 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 ASRGL1Q7L266 308 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 DYMQ7RTS9 669 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 PNMA8AQ86V59 439 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 SNX29Q8TEQ0 813 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 TBC1D31Q96DN5 1066 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 SPDL1Q96EA4 605 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 SLC16A3O15427 465 aaKnown RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 DDX3YO15523 660 aaKnown RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 AHCYL1O43865 530 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 ATP2C2O75185 946 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 AFPP02771 609 aaKnown RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 ALDH5A1P51649 535 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 KCNH2Q12809 1159 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 KIAA1755Q5JYT7 1200 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 TBC1D1Q86TI0 1168 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 RFFLQ8WZ73 363 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 SELENOSQ9BQE4 189 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 ECT2Q9H8V3 914 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 ZNF287Q9HBT7 754 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 METTL14Q9HCE5 456 aaKnown RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 RPL26L1Q9UNX3 145 aaKnown RBP11.51□□□□□ -0.57
CAPN3-205ENST00000357568 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 ARL2BPQ9Y2Y0 163 aa11.51□□□□□ -0.57
CAPN3-205ENST00000357568 KIAA0391O15091 583 aaKnown RBP11.5□□□□□ -0.57
CAPN3-205ENST00000357568 ATP5HO75947 161 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms