RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 KATNBL1Q9H079 304 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 MMRN2Q9H8L6 949 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 PDGFCQ9NRA1 345 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 TBX20Q9UMR3 447 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 LAMC2Q13753 1193 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 MEA1Q16626 185 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 MAML3Q96JK9 1138 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 POLR3FQ9H1D9 316 aaPredicted RBP25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 AGPAT5Q9NUQ2 364 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 SLC5A4Q9NY91 659 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 TLL2Q9Y6L7 1015 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 GOLGA6L9A6NEM1 432 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 KIF2AO00139 706 aaPredicted RBP25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 MAPK13O15264 365 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 TUBB4AP04350 444 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 ARL2P36404 184 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 PPP2R5AQ15172 486 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 RAD9BQ6WBX8 426 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 EXOC8Q8IYI6 725 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 SLC7A3Q8WY07 619 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 EMID1Q96A84 441 aaPredicted RBP25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 PPP2R2CQ9Y2T4 447 aa25.02■■□□□ 1.6
SCAMP3-202ENST00000355379 SOWAHDA6NJG2 315 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 GH1P01241 217 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 HNRNPH3P31942 346 aaKnown RBP25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 CYP2J2P51589 502 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 CDK17Q00537 523 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 ARHGAP1Q07960 439 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 TAF1CQ15572 869 aaPredicted RBP25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 PTPN14Q15678 1187 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 COPS5Q92905 334 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 SLC35C1Q96A29 364 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 SMARCAD1Q9H4L7 1026 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 ZNHIT6Q9NWK9 470 aaKnown RBP25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 CPA4Q9UI42 421 aa25.01■■□□□ 1.59
SCAMP3-202ENST00000355379 DENND3A2RUS2 1198 aa25■■□□□ 1.59
SCAMP3-202ENST00000355379 GTPBP10A4D1E9 387 aaKnown RBP25■■□□□ 1.59
SCAMP3-202ENST00000355379 MAFO75444 373 aaPredicted RBP25■■□□□ 1.59
SCAMP3-202ENST00000355379 SNAI1O95863 264 aaPredicted RBP25■■□□□ 1.59
SCAMP3-202ENST00000355379 SOX10P56693 466 aa25■■□□□ 1.59
SCAMP3-202ENST00000355379 IFNL1Q8IU54 200 aa25■■□□□ 1.59
SCAMP3-202ENST00000355379 REXO1L1PQ8IX06 675 aa25■■□□□ 1.59
SCAMP3-202ENST00000355379 CCDC155Q8N6L0 562 aa25■■□□□ 1.59
SCAMP3-202ENST00000355379 ATP8B4Q8TF62 1192 aa25■■□□□ 1.59
SCAMP3-202ENST00000355379 GLG1Q92896 1179 aa25■■□□□ 1.59
SCAMP3-202ENST00000355379 CCDC102AQ96A19 550 aa25■■□□□ 1.59
SCAMP3-202ENST00000355379 C16orf45Q96MC5 204 aaPredicted RBP25■■□□□ 1.59
SCAMP3-202ENST00000355379 ARHGAP28Q9P2N2 729 aa25■■□□□ 1.59
SCAMP3-202ENST00000355379 GAS2O43903 313 aaKnown RBP24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 EXOC3O60645 756 aa24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 TNNT1P13805 278 aa24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 NAMPTP43490 491 aa24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 IRF5Q13568 498 aa24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 MORN1Q5T089 497 aa24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 WDR59Q6PJI9 974 aa24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 TOGARAM2Q6ZUX3 1019 aa24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 NUCKS1Q9H1E3 243 aaKnown RBP24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 FAM207AQ9NSI2 230 aaPredicted RBP24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 CEP72Q9P209 647 aa24.99■■□□□ 1.59
SCAMP3-202ENST00000355379 MCCD1P59942 119 aaPredicted RBP24.98■■□□□ 1.59
SCAMP3-202ENST00000355379 MTF1Q14872 753 aa24.98■■□□□ 1.59
SCAMP3-202ENST00000355379 DCAF17Q5H9S7 520 aaPredicted RBP24.98■■□□□ 1.59
SCAMP3-202ENST00000355379 C17orf99Q6UX52 265 aa24.98■■□□□ 1.59
SCAMP3-202ENST00000355379 XXYLT1Q8NBI6 393 aa24.98■■□□□ 1.59
SCAMP3-202ENST00000355379 TINF2Q9BSI4 451 aa24.98■■□□□ 1.59
SCAMP3-202ENST00000355379 LSM14BQ9BX40 385 aaKnown RBP24.98■■□□□ 1.59
SCAMP3-202ENST00000355379 ABHD16BQ9H3Z7 469 aa24.98■■□□□ 1.59
SCAMP3-202ENST00000355379 PLCB1Q9NQ66 1216 aa24.98■■□□□ 1.59
SCAMP3-202ENST00000355379 FAM155AB1AL88 458 aaPredicted RBP24.97■■□□□ 1.59
SCAMP3-202ENST00000355379 EPHB6O15197 1021 aa24.97■■□□□ 1.59
SCAMP3-202ENST00000355379 CCDC175P0C221 793 aa24.97■■□□□ 1.59
SCAMP3-202ENST00000355379 PLCB4Q15147 1175 aa24.97■■□□□ 1.59
SCAMP3-202ENST00000355379 BAP1Q92560 729 aa24.97■■□□□ 1.59
SCAMP3-202ENST00000355379 HSPBP1Q9NZL4 362 aa24.97■■□□□ 1.59
SCAMP3-202ENST00000355379 PLAGL2Q9UPG8 496 aa24.97■■□□□ 1.59
SCAMP3-202ENST00000355379 ADGRG1Q9Y653 693 aa24.97■■□□□ 1.59
SCAMP3-202ENST00000355379 ADGRA3Q8IWK6 1321 aa24.97■■□□□ 1.59
SCAMP3-202ENST00000355379 TLR2O60603 784 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 NOL4O94818 638 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 GLRA2P23416 452 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 SREBF2Q12772 1141 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 MAP2K5Q13163 448 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 TMEM63BQ5T3F8 832 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 TCERG1LQ5VWI1 586 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 INTS8Q75QN2 995 aaKnown RBP24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 NPLOC4Q8TAT6 608 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 TMEM143Q96AN5 459 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 HHIPL1Q96JK4 782 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 CHP1Q99653 195 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 JPH2Q9BR39 696 aaPredicted RBP24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 KIFC3Q9BVG8 833 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 HBP1O60381 514 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 BFSP1Q12934 665 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 BRDTQ58F21 947 aaPredicted RBP24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 IER5Q5VY09 327 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 IQSEC1Q6DN90 963 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 PDXDC1Q6P996 788 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 GBP6Q6ZN66 633 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 CACNA2D4Q7Z3S7 1137 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms