RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CEP63Q96MT8 703 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 RAB34Q9BZG1 259 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 A0A1B0GVG6 124 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 PLA2G4BP0C869 781 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 RAB27AP51159 221 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 RWDD2BP57060 319 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 ICA1Q05084 483 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 C10orf76Q5T2E6 689 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 SLFN11Q7Z7L1 901 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 FBF1Q8TES7 1133 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 TEKT4Q8WW24 435 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 SYT15Q9BQS2 421 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 ATP8A2Q9NTI2 1148 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 USP40Q9NVE5 1235 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 KLHL14Q9P2G3 628 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 RASAL2Q9UJF2 1139 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 LRRD1A4D1F6 860 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 A6NHS1 94 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 SFI1A8K8P3 1242 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 LRRN2O75325 713 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 PAPOLAP51003 745 aaKnown RBP16.03■□□□□ 0.16
CLCN1-201ENST00000343257 ZNF131P52739 623 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 RNF220Q5VTB9 566 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 TMEM154Q6P9G4 183 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 KCTD10Q9H3F6 313 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 GPCPD1Q9NPB8 672 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 EDIL3O43854 480 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 AKAP3O75969 853 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 KCNA1Q09470 495 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 PLS1Q14651 629 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
CLCN1-201ENST00000343257 CCDC137Q6PK04 289 aaKnown RBP16.03■□□□□ 0.16
CLCN1-201ENST00000343257 ECHDC2Q86YB7 292 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 ZDHHC14Q8IZN3 488 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 SUPT20HQ8NEM7 779 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 DLGAP2Q9P1A6 1054 aa16.03■□□□□ 0.16
CLCN1-201ENST00000343257 PFASO15067 1338 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 BTNL10A8MVZ5 291 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 RAD21O60216 631 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 GNA14O95837 355 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 BRAFP15056 766 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 RFC5P40937 340 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 ERFP50548 548 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 CTTNQ14247 550 aaKnown RBP16.02■□□□□ 0.16
CLCN1-201ENST00000343257 PRUNE1Q86TP1 453 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 ERP27Q96DN0 273 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 MRRFQ96E11 262 aaKnown RBP16.02■□□□□ 0.16
CLCN1-201ENST00000343257 NUDCD1Q96RS6 583 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 TRIM7Q9C029 511 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 MYH3P11055 1940 aa16.02■□□□□ 0.16
CLCN1-201ENST00000343257 SLMAPQ14BN4 828 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 ZNF746Q6NUN9 644 aaPredicted RBP16.02■□□□□ 0.15
CLCN1-201ENST00000343257 VSTM1Q6UX27 236 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 INTS8Q75QN2 995 aaKnown RBP16.02■□□□□ 0.15
CLCN1-201ENST00000343257 SLC51AQ86UW1 340 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 SRRM1Q8IYB3 904 aaKnown RBP16.02■□□□□ 0.15
CLCN1-201ENST00000343257 PRELID2Q8N945 189 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 ANKLE1Q8NAG6 615 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 SPOCK2Q92563 424 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 MYLK2Q9H1R3 596 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 RXFP1Q9HBX9 757 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 COG5Q9UP83 839 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 BZW2Q9Y6E2 419 aaKnown RBP16.02■□□□□ 0.15
CLCN1-201ENST00000343257 CASZ1Q86V15 1759 aa16.02■□□□□ 0.15
CLCN1-201ENST00000343257 POTEFA5A3E0 1075 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 ATMINO43313 823 aaPredicted RBP16.01■□□□□ 0.15
CLCN1-201ENST00000343257 ENTPD5O75356 428 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 LUC7L3O95232 432 aaKnown RBP16.01■□□□□ 0.15
CLCN1-201ENST00000343257 OAS1P00973 400 aaKnown RBP16.01■□□□□ 0.15
CLCN1-201ENST00000343257 POTEIP0CG38 1075 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 GM2AP17900 193 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 GBP1P32455 592 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 MESDQ14696 234 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 C12orf60Q5U649 245 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 CGB2Q6NT52 195 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 POTEGQ6S5H5 508 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 POTEEQ6S8J3 1075 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 SMIM5Q71RC9 77 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 BTBD6Q96KE9 485 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 CTTNBP2NLQ9P2B4 639 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 PCDHA12Q9UN75 941 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 STAT1P42224 750 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
CLCN1-201ENST00000343257 PABPC4Q13310 644 aaKnown RBP eCLIP16.01■□□□□ 0.15
CLCN1-201ENST00000343257 CYP4X1Q8N118 509 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 UCMAQ8WVF2 138 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
CLCN1-201ENST00000343257 CDC42EP4Q9H3Q1 356 aaKnown RBP16.01■□□□□ 0.15
CLCN1-201ENST00000343257 DDX25Q9UHL0 483 aaKnown RBP16.01■□□□□ 0.15
CLCN1-201ENST00000343257 C2CD2Q9Y426 696 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 SPAG7O75391 227 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 PTGIRP43119 386 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 KYNUQ16719 465 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 TMEM119Q4V9L6 283 aa16.01■□□□□ 0.15
CLCN1-201ENST00000343257 DPY19L2P1Q6NXN4 242 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms