RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PIDD1Q9HB75 910 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 C8orf4Q9NR00 106 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 GNPTGQ9UJJ9 305 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ZNF233A6NK53 670 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 TRMUO75648 421 aaKnown RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 KLHL2O95198 593 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 PSMG1O95456 288 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 KRT7P08729 469 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 TPBGLP0DKB5 382 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 GFAPP14136 432 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SLC16A2P36021 539 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 NUDT1P36639 197 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 GPD2P43304 727 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 HSD17B4P51659 736 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 IL9RQ01113 521 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 TBCCQ15814 346 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CCDC81Q6ZN84 652 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 PCGF5Q86SE9 256 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ZNF398Q8TD17 642 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 FBXW7Q969H0 707 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 DYDC2Q96IM9 177 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 HERC2P3Q9BVR0 1158 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 C1orf115Q9H7X2 142 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 BRD9Q9H8M2 597 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 NLRC4Q9NPP4 1024 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CCDC177Q9NQR7 707 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 EXOC7Q9UPT5 735 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 HPS5Q9UPZ3 1129 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 DIS3Q9Y2L1 958 aaKnown RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 LINC00854A0A1B0GVQ3 168 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 PEX11AO75192 247 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 UBOX5O94941 541 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 UBL4AP11441 157 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 LONP1P36776 959 aaKnown RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ECT2LQ008S8 904 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 SCRN3Q0VDG4 424 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 NR1I3Q14994 352 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 GALNTL6Q49A17 601 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 SIGIRRQ6IA17 410 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 BEND5Q7L4P6 421 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 HEATR4Q86WZ0 1026 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 LRRC34Q8IZ02 419 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 TRIML2Q8N7C3 387 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ANKRD49Q8WVL7 239 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 UBLCP1Q8WVY7 318 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 COQ7Q99807 217 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 TEX51A0A1B0GUA7 166 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 APOL1O14791 398 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 SERPINI2O75830 405 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 VARSP26640 1264 aaKnown RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 PRKAR1BP31321 381 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 CHN2P52757 468 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 DAB2P98082 770 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 GALNT1Q10472 559 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 PROSER3Q2NL68 480 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 SH3D19Q5HYK7 790 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 TCHHL1Q5QJ38 904 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 PPP2R2DQ66LE6 453 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 KLHL35Q6PF15 583 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 LVRNQ6Q4G3 990 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ANO5Q75V66 913 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ASRGL1Q7L266 308 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 RNF169Q8NCN4 708 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 OSCP1Q8WVF1 389 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 WASF1Q92558 559 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 TMA16Q96EY4 203 aaKnown RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 SERHL2Q9H4I8 314 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ATMINO43313 823 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ESRRAP11474 423 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 POLGP54098 1239 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 RTP1P59025 263 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 CYP4F2P78329 520 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 RUNX1T1Q06455 604 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 CYP4F3Q08477 520 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 SNRNP48Q6IEG0 339 aaKnown RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 LRRC74BQ6ZQY2 392 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 CDR2LQ86X02 465 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ERI1Q8IV48 349 aaKnown RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 FAM20CQ8IXL6 584 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ADSSL1Q8N142 457 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 LSMEM1Q8N8F7 131 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 GRPEL2Q8TAA5 225 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 AGXT2Q9BYV1 514 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 RHOBTB2Q9BYZ6 727 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 INO80BQ9C086 356 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ZHX3Q9H4I2 956 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 SELENONQ9NZV5 590 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 LIMA1Q9UHB6 759 aaKnown RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 HMGN1P05114 100 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 CHRNB1P11230 501 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 TRIM23P36406 574 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 IFNAR2P48551 515 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 GALK1P51570 392 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 GNG2P59768 71 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 ACAP2Q15057 778 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 EPHA7Q15375 998 aa4.43□□□□□ -1.7
NEDD4-201ENST00000338963 EAPPQ56P03 285 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 RBM20Q5T481 1227 aaKnown RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 SHQ1Q6PI26 577 aaKnown RBP4.43□□□□□ -1.7
NEDD4-201ENST00000338963 DHRS4L2Q6PKH6 230 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms