RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PRKCIP41743 596 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 KRT25Q7Z3Z0 450 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 HEATR3Q7Z4Q2 680 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 KIFAP3Q92845 792 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 GRAMD1AQ96CP6 724 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 TAF1P21675 1872 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 GSTA2P09210 222 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 PDIA5Q14554 519 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 SLC51AQ86UW1 340 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 BARHL2Q9NY43 387 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 CTTNBP2NLQ9P2B4 639 aa26.23■■□□□ 1.79
SOX1-201ENST00000330949 KIF13BQ9NQT8 1826 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 PYGLP06737 847 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 RARGP13631 454 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 SOGA3Q5TF21 947 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 GLIS3Q8NEA6 775 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 SH3TC2Q8TF17 1288 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 DDX12PQ92771 950 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 ARHGEF2Q92974 986 aaKnown RBP26.22■■□□□ 1.79
SOX1-201ENST00000330949 GRHL1Q9NZI5 618 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 LRP5O75197 1615 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 PTDSS1P48651 473 aaKnown RBP26.22■■□□□ 1.79
SOX1-201ENST00000330949 GNAQP50148 359 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 NONOQ15233 471 aaKnown RBP eCLIP26.22■■□□□ 1.79
SOX1-201ENST00000330949 INTS8Q75QN2 995 aaKnown RBP26.22■■□□□ 1.79
SOX1-201ENST00000330949 DNAAF5Q86Y56 855 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 CELF1Q92879 486 aaKnown RBP26.22■■□□□ 1.79
SOX1-201ENST00000330949 RBM41Q96IZ5 413 aaKnown RBP26.22■■□□□ 1.79
SOX1-201ENST00000330949 TMEM237Q96Q45 408 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 USP40Q9NVE5 1235 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 NENFQ9UMX5 172 aa26.22■■□□□ 1.79
SOX1-201ENST00000330949 FGFR4P22455 802 aa26.21■■□□□ 1.79
SOX1-201ENST00000330949 MUM1Q2TAK8 710 aa26.21■■□□□ 1.79
SOX1-201ENST00000330949 LRRC23Q53EV4 343 aaPredicted RBP26.21■■□□□ 1.79
SOX1-201ENST00000330949 KLHL23Q8NBE8 558 aa26.21■■□□□ 1.79
SOX1-201ENST00000330949 RBBP8NLQ8NC74 664 aaPredicted RBP26.21■■□□□ 1.79
SOX1-201ENST00000330949 SCOCQ9UIL1 159 aa26.21■■□□□ 1.79
SOX1-201ENST00000330949 RFC5P40937 340 aa26.21■■□□□ 1.79
SOX1-201ENST00000330949 SETDB1Q15047 1291 aa26.21■■□□□ 1.79
SOX1-201ENST00000330949 SDCCAG8Q86SQ7 713 aaPredicted RBP26.21■■□□□ 1.79
SOX1-201ENST00000330949 INPP5DQ92835 1189 aa26.21■■□□□ 1.79
SOX1-201ENST00000330949 TGS1Q96RS0 853 aaKnown RBP26.21■■□□□ 1.79
SOX1-201ENST00000330949 ANKRD36CQ5JPF3 1778 aa26.21■■□□□ 1.79
SOX1-201ENST00000330949 PODXLO00592 558 aa26.2■■□□□ 1.79
SOX1-201ENST00000330949 POLE2P56282 527 aa26.2■■□□□ 1.79
SOX1-201ENST00000330949 MGAT5Q09328 741 aa26.2■■□□□ 1.79
SOX1-201ENST00000330949 CAVIN4Q5BKX8 364 aa26.2■■□□□ 1.79
SOX1-201ENST00000330949 WASHC2DQ5SRD0 308 aa26.2■■□□□ 1.79
SOX1-201ENST00000330949 NEK8Q86SG6 692 aa26.2■■□□□ 1.79
SOX1-201ENST00000330949 RAD54LQ92698 747 aa26.2■■□□□ 1.79
SOX1-201ENST00000330949 CHCHD3Q9NX63 227 aaKnown RBP26.2■■□□□ 1.79
SOX1-201ENST00000330949 UCHL3P15374 230 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 RNF220Q5VTB9 566 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 OR52E8Q6IFG1 317 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 VSIG1Q86XK7 387 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 ECHDC2Q86YB7 292 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 MARCH10Q8NA82 808 aaPredicted RBP26.2■■□□□ 1.78
SOX1-201ENST00000330949 FAM13CQ8NE31 585 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 FGD4Q96M96 766 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 KANSL2Q9H9L4 492 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 ERVK-5Q9HDB9 667 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 STRCQ7RTU9 1775 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 HGSO14964 777 aaPredicted RBP26.2■■□□□ 1.78
SOX1-201ENST00000330949 AFPP02771 609 aaKnown RBP26.2■■□□□ 1.78
SOX1-201ENST00000330949 RBM5P52756 815 aaKnown RBP eCLIP26.2■■□□□ 1.78
SOX1-201ENST00000330949 DDB1Q16531 1140 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 ADAT2Q7Z6V5 191 aaKnown RBP26.2■■□□□ 1.78
SOX1-201ENST00000330949 IFT43Q96FT9 208 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 PNMA5Q96PV4 448 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 DDX23Q9BUQ8 820 aaKnown RBP26.2■■□□□ 1.78
SOX1-201ENST00000330949 TAOK3Q9H2K8 898 aa26.2■■□□□ 1.78
SOX1-201ENST00000330949 DDX3YO15523 660 aaKnown RBP26.19■■□□□ 1.78
SOX1-201ENST00000330949 LMNAP02545 664 aaKnown RBP26.19■■□□□ 1.78
SOX1-201ENST00000330949 KRT13P13646 458 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 PRDX5P30044 214 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 KCNH2Q12809 1159 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 ORC2Q13416 577 aaPredicted RBP26.19■■□□□ 1.78
SOX1-201ENST00000330949 MTFR1Q15390 333 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 DCAF12L1Q5VU92 463 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 VSTM1Q6UX27 236 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 RPL26L1Q9UNX3 145 aaKnown RBP26.19■■□□□ 1.78
SOX1-201ENST00000330949 COPB2P35606 906 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 ANKLE1Q8NAG6 615 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 FAM136AQ96C01 138 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 SERPINB12Q96P63 405 aa26.19■■□□□ 1.78
SOX1-201ENST00000330949 COL1A1P02452 1464 aaPredicted RBP26.18■■□□□ 1.78
SOX1-201ENST00000330949 TSPY2A6NKD2 308 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 RANBP1P43487 201 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 UBAP2Q5T6F2 1119 aaKnown RBP26.18■■□□□ 1.78
SOX1-201ENST00000330949 ANKRD42Q8N9B4 389 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 FAM84BQ96KN1 310 aaPredicted RBP26.18■■□□□ 1.78
SOX1-201ENST00000330949 KCNK9Q9NPC2 374 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 LRCH1Q9Y2L9 728 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 PITPNM2Q9BZ72 1349 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 EYA4O95677 639 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 CHRNA3P32297 505 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 TXKP42681 527 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 RPL21P46778 160 aaKnown RBP26.18■■□□□ 1.78
SOX1-201ENST00000330949 FAM26FQ5R3K3 315 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 OTUD6AQ7L8S5 288 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms