RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 HOOK2Q96ED9 719 aa17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 GOLGA6BA6NDN3 693 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 GLI1P08151 1106 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 TMEM253P0C7T8 217 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 FDX1P10109 184 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 QARSP47897 775 aaKnown RBP17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 RARRES1P49788 294 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 ZNF280AP59817 542 aaPredicted RBP17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 TNNC1P63316 161 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 KIF22Q14807 665 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 NBPF9Q3BBW0 867 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 IL31RAQ8NI17 732 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 ZFP91Q96JP5 570 aaPredicted RBP17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 FAM204AQ9H8W3 233 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 MYOZ2Q9NPC6 264 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 PLS3P13797 630 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 CYP2J2P51589 502 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 GTF2BQ00403 316 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 TCEAL1Q15170 157 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 INTS8Q75QN2 995 aaKnown RBP17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 C4orf19Q8IY42 314 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 SLC16A10Q8TF71 515 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 ACCSQ96QU6 501 aa17.19■□□□□ 0.34
SMARCD2-202ENST00000323347 EXOC3O60645 756 aa17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 CTNND1O60716 968 aaKnown RBP17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 GALCP54803 685 aa17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 MYL7Q01449 175 aa17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 PAK2Q13177 524 aa17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 RASA3Q14644 834 aa17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 CIAPIN1Q6FI81 312 aa17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 SLC17A8Q8NDX2 589 aa17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 TTC7AQ9ULT0 858 aaPredicted RBP17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 PACSIN2Q9UNF0 486 aaPredicted RBP17.18■□□□□ 0.34
SMARCD2-202ENST00000323347 GOLGA8KD6RF30 607 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 HEXIM1O94992 359 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 NOP2P46087 812 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 PPATQ06203 517 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 ZSCAN26Q16670 478 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 XRRA1Q6P2D8 792 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 NT5DC3Q86UY8 548 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 SYCP3Q8IZU3 236 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 HES6Q96HZ4 224 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 GDAP1L1Q96MZ0 367 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 PPP1R9AQ9ULJ8 1098 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 K7ENM7 598 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 KCNK3O14649 394 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 OPA1O60313 960 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 PHACTR2O75167 634 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 HADHBP55084 474 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 MTMR1Q13613 665 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 TNFAIP1Q13829 316 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 PHLDB3Q6NSJ2 640 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 METTL13Q8N6R0 699 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 RDM1Q8NG50 284 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 RFFLQ8WZ73 363 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 IWS1Q96ST2 819 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 KRT12Q99456 494 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.17■□□□□ 0.348e-10■■■■□ 26.7
SMARCD2-202ENST00000323347 ANKEF1Q9NU02 776 aa17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 DIS3Q9Y2L1 958 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-202ENST00000323347 CCDC188H7C350 402 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 TRIM49P0CI25 452 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 TRIM49CP0CI26 452 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 KRT13P13646 458 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 CAPN2P17655 700 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 CARSP49589 748 aaKnown RBP17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 NCKAP1LP55160 1127 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 PGM5Q15124 567 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 EPC2Q52LR7 807 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 IQCKQ8N0W5 287 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 TSEN2Q8NCE0 465 aaKnown RBP17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 WHAMMQ8TF30 809 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 PDGFDQ9GZP0 370 aaPredicted RBP17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 EPB41L5Q9HCM4 733 aa17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 ASTN2O75129 1339 aaPredicted RBP17.16■□□□□ 0.34
SMARCD2-202ENST00000323347 DDX39AO00148 427 aaKnown RBP17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 SHOX2O60902 331 aaPredicted RBP17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 ALAS1P13196 640 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 SFNP31947 248 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 VAMP7P51809 220 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 JAK3P52333 1124 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 SPP2Q13103 211 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 C1orf220Q5T0J3 134 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 PEX26Q7Z412 305 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 CD302Q8IX05 232 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 GOLGA6L1Q8N7Z2 621 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 C1orf131Q8NDD1 294 aaKnown RBP17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 CASKIN2Q8WXE0 1202 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 HVCN1Q96D96 273 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 TAAR1Q96RJ0 339 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 SENP7Q9BQF6 1050 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 RAVER2Q9HCJ3 691 aaKnown RBP17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 MYH11P35749 1972 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 PGRMC1O00264 195 aaKnown RBP17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 RAD51CO43502 376 aa17.15■□□□□ 0.34
SMARCD2-202ENST00000323347 YWHABP31946 246 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms