RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TRIM49CP0CI26 452 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 GALCP54803 685 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 SNRPFP62306 86 aaKnown RBP24.3■■□□□ 1.48
PNKP-201ENST00000322344 SF3B2Q13435 895 aaKnown RBP24.3■■□□□ 1.48
PNKP-201ENST00000322344 MREGQ8N565 214 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 SYT11Q9BT88 431 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 TBC1D22BQ9NU19 505 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 GOLGA6AQ9NYA3 693 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 PGRMC1O00264 195 aaKnown RBP24.3■■□□□ 1.48
PNKP-201ENST00000322344 CEP104O60308 925 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 QARSP47897 775 aaKnown RBP24.3■■□□□ 1.48
PNKP-201ENST00000322344 CARSP49589 748 aaKnown RBP24.3■■□□□ 1.48
PNKP-201ENST00000322344 CETN1Q12798 172 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 WHAMMQ8TF30 809 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 ZHX2Q9Y6X8 837 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 PHF20L1A8MW92 1017 aa24.29■■□□□ 1.48
PNKP-201ENST00000322344 CCDC188H7C350 402 aa24.29■■□□□ 1.48
PNKP-201ENST00000322344 WNT10BO00744 389 aa24.29■■□□□ 1.48
PNKP-201ENST00000322344 ZBTB48P10074 688 aaPredicted RBP24.29■■□□□ 1.48
PNKP-201ENST00000322344 OLIG1Q8TAK6 271 aa24.29■■□□□ 1.48
PNKP-201ENST00000322344 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.29■■□□□ 1.483e-9■■■□□ 18.5
PNKP-201ENST00000322344 GPR88Q9GZN0 384 aa24.29■■□□□ 1.48
PNKP-201ENST00000322344 KIAA1683Q9H0B3 1180 aa24.29■■□□□ 1.48
PNKP-201ENST00000322344 PLS3P13797 630 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 RARRES1P49788 294 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 RASGEF1CQ8N431 466 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 TSEN2Q8NCE0 465 aaKnown RBP24.28■■□□□ 1.48
PNKP-201ENST00000322344 IL31RAQ8NI17 732 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 RFFLQ8WZ73 363 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 ST6GALNAC4Q9H4F1 302 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 NFU1Q9UMS0 254 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 TMCO5BA8MYB1 307 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 MAPK13O15264 365 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 RAD51CO43502 376 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 ITGB3BPQ13352 177 aaPredicted RBP24.28■■□□□ 1.48
PNKP-201ENST00000322344 KIF22Q14807 665 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 NT5DC3Q86UY8 548 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 GLYCTKQ8IVS8 523 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 METTL13Q8N6R0 699 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 SLC17A8Q8NDX2 589 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 SYTL5Q8TDW5 730 aaPredicted RBP24.28■■□□□ 1.48
PNKP-201ENST00000322344 CASKIN2Q8WXE0 1202 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 IFT81Q8WYA0 676 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 IWS1Q96ST2 819 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 SLC38A10Q9HBR0 1119 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 PKD2L1Q9P0L9 805 aa24.28■■□□□ 1.48
PNKP-201ENST00000322344 ALAS1P13196 640 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 DPEP1P16444 411 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 KCNA3P22001 575 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 MTMR1Q13613 665 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 DAAM2Q86T65 1068 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 CTNNBL1Q8WYA6 563 aaPredicted RBP24.27■■□□□ 1.48
PNKP-201ENST00000322344 AMFRQ9UKV5 643 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 DIS3Q9Y2L1 958 aaKnown RBP24.27■■□□□ 1.48
PNKP-201ENST00000322344 SAMM50Q9Y512 469 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 TNFAIP3P21580 790 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 RNASE9P60153 205 aaKnown RBP24.27■■□□□ 1.48
PNKP-201ENST00000322344 EN1Q05925 392 aaPredicted RBP24.27■■□□□ 1.48
PNKP-201ENST00000322344 CXCL9Q07325 125 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 NBPF9Q3BBW0 867 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 KLHL7Q8IXQ5 586 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 HES6Q96HZ4 224 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 CCDC43Q96MW1 224 aaKnown RBP24.27■■□□□ 1.48
PNKP-201ENST00000322344 MYOZ2Q9NPC6 264 aa24.27■■□□□ 1.48
PNKP-201ENST00000322344 MRPS9P82933 396 aaKnown RBP24.26■■□□□ 1.47
PNKP-201ENST00000322344 CUL1Q13616 776 aa24.26■■□□□ 1.47
PNKP-201ENST00000322344 TNFAIP1Q13829 316 aa24.26■■□□□ 1.47
PNKP-201ENST00000322344 DNAAF5Q86Y56 855 aa24.26■■□□□ 1.47
PNKP-201ENST00000322344 LMO3Q8TAP4 145 aa24.26■■□□□ 1.47
PNKP-201ENST00000322344 ISCUQ9H1K1 167 aa24.26■■□□□ 1.47
PNKP-201ENST00000322344 GOLPH3Q9H4A6 298 aa24.26■■□□□ 1.47
PNKP-201ENST00000322344 NOC2LQ9Y3T9 749 aaKnown RBP24.26■■□□□ 1.47
PNKP-201ENST00000322344 SHOX2O60902 331 aaPredicted RBP24.25■■□□□ 1.47
PNKP-201ENST00000322344 VAMP7P51809 220 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 GTF2BQ00403 316 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 RASA3Q14644 834 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 PLS1Q14651 629 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 CFAP58Q5T655 872 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 C4orf19Q8IY42 314 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 TAF1DQ9H5J8 278 aaPredicted RBP24.25■■□□□ 1.47
PNKP-201ENST00000322344 TTC7AQ9ULT0 858 aaPredicted RBP24.25■■□□□ 1.47
PNKP-201ENST00000322344 MYH11P35749 1972 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 JAK3P52333 1124 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 CIAPIN1Q6FI81 312 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 PHLDB3Q6NSJ2 640 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 CPXCR1Q8N123 301 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 XXYLT1Q8NBI6 393 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 RDH13Q8NBN7 331 aa24.25■■□□□ 1.47
PNKP-201ENST00000322344 RAVER2Q9HCJ3 691 aaKnown RBP24.25■■□□□ 1.47
PNKP-201ENST00000322344 EMSYQ7Z589 1322 aa24.24■■□□□ 1.47
PNKP-201ENST00000322344 ESYT3A0FGR9 886 aa24.24■■□□□ 1.47
PNKP-201ENST00000322344 ZSCAN5CA6NGD5 496 aaPredicted RBP24.24■■□□□ 1.47
PNKP-201ENST00000322344 PMM2O15305 246 aa24.24■■□□□ 1.47
PNKP-201ENST00000322344 FDX1P10109 184 aa24.24■■□□□ 1.47
PNKP-201ENST00000322344 YWHABP31946 246 aaKnown RBP24.24■■□□□ 1.47
PNKP-201ENST00000322344 MAEAQ7L5Y9 396 aa24.24■■□□□ 1.47
PNKP-201ENST00000322344 IQCKQ8N0W5 287 aa24.24■■□□□ 1.47
PNKP-201ENST00000322344 SLC35G2Q8TBE7 412 aa24.24■■□□□ 1.47
PNKP-201ENST00000322344 ZIM3Q96PE6 472 aa24.24■■□□□ 1.47
PNKP-201ENST00000322344 ANKRD62A6NC57 917 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms