RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 PITPNM3Q9BZ71 974 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 CARD9Q9H257 536 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 VCXQ9H320 206 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 MRPL11Q9Y3B7 192 aaKnown RBP13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 COL5A2P05997 1499 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 PFASO15067 1338 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 GDF11O95390 407 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 TNNI1P19237 187 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 GCLMP48507 274 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 SLC29A2Q14542 456 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 RNF207Q6ZRF8 634 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 FAM47EQ6ZV65 393 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 CD302Q8IX05 232 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 SRRM1Q8IYB3 904 aaKnown RBP13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 GLIS3Q8NEA6 775 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 THOC1Q96FV9 657 aaKnown RBP13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 CLGNO14967 610 aa13.71□□□□□ -0.22
DNMT3A-202ENST00000321117 FMO5P49326 533 aa13.71□□□□□ -0.22
DNMT3A-202ENST00000321117 TRPM8Q7Z2W7 1104 aa13.71□□□□□ -0.22
DNMT3A-202ENST00000321117 PABPC3Q9H361 631 aaKnown RBP13.71□□□□□ -0.22
DNMT3A-202ENST00000321117 ECT2Q9H8V3 914 aa13.71□□□□□ -0.22
DNMT3A-202ENST00000321117 RGL1Q9NZL6 768 aa13.71□□□□□ -0.22
DNMT3A-202ENST00000321117 PHF2O75151 1096 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 FGRP09769 529 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 MYCLP12524 364 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 KCNK18Q7Z418 384 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 CPXCR1Q8N123 301 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 AGPAT1Q99943 283 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 EIF2AK1Q9BQI3 630 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 TCP11X1B4DZS4 312 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 EYA4O95677 639 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 HARSP12081 509 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 SESN3P58005 492 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 KCNMA1Q12791 1236 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 XKR9Q5GH70 373 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 EXOC1LA0A1B0GW35 172 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 CAND2O75155 1236 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 KAZNQ674X7 775 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 YTHDF3Q7Z739 585 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 OGFOD1Q8N543 542 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 PRPF38AQ8NAV1 312 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 ZNF564Q8TBZ8 553 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 DCAF4Q8WV16 495 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 DYDC2Q96IM9 177 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 WNT8AQ9H1J5 351 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 RAB20Q9NX57 234 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 DBR1Q9UK59 544 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 SUFUQ9UMX1 484 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 GGPS1O95749 300 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 ARHGAP24Q8N264 748 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 SEL1LQ9UBV2 794 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 APEX2Q9UBZ4 518 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 ALG6Q9Y672 507 aa13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 ZNF335Q9H4Z2 1342 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-202ENST00000321117 BCL9O00512 1426 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 FAM196BA6NMK8 535 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 HMGB2P26583 209 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 ITGB3BPQ13352 177 aaPredicted RBP13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 AOC3Q16853 763 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 USP15Q9Y4E8 981 aaPredicted RBP13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 F8VZ95 297 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 CES2O00748 559 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 SWT1Q5T5J6 900 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 LRRC34Q8IZ02 419 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 NUP85Q9BW27 656 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 RIOX1Q9H6W3 641 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 CNOT8Q9UFF9 292 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 ANAPC7Q9UJX3 599 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 SLC26A4O43511 780 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 CIB2O75838 187 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 RPA1P27694 616 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 LMNB2Q03252 620 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 ZNF449Q6P9G9 518 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 FAM196AQ6ZSG2 479 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 TMC3Q7Z5M5 1100 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 PHLDB2Q86SQ0 1253 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 EIF1ADQ8N9N8 165 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 CFAP57Q96MR6 1250 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 MMTAG2Q9BU76 263 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 PI4KBQ9UBF8 816 aa13.69□□□□□ -0.22
DNMT3A-202ENST00000321117 GPR75-ASB3A0A0A6YYF3 556 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 GOLGA8IPA6NC78 632 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 GOLGA8JA6NMD2 632 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 TRAPPC3O43617 180 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 RFX1P22670 979 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 CA4P22748 312 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 CATSPER3Q86XQ3 398 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 POMGNT1Q8WZA1 660 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 ETNK1Q9HBU6 452 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 NOD2Q9HC29 1040 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 TUBGCP6Q96RT7 1819 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 MYH8P13535 1937 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 EMSYQ7Z589 1322 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 RASA4BC9J798 803 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms