RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TRAPPC11Q7Z392 1133 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 FAM71BQ8TC56 605 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 HNRNPLLQ8WVV9 542 aaKnown RBP8.3□□□□□ -1.08
TRIM55-202ENST00000315962 TMEM143Q96AN5 459 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 FIZ1Q96SL8 496 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 DNAJC7Q99615 494 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 LRRC1Q9BTT6 524 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 ASCC2Q9H1I8 757 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-202ENST00000315962 SEPT9Q9UHD8 586 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-202ENST00000315962 AJAP1Q9UKB5 411 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-202ENST00000315962 RPTORQ8N122 1335 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 PITPNM2Q9BZ72 1349 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 NOP2P46087 812 aaKnown RBP8.3□□□□□ -1.08
TRIM55-202ENST00000315962 ZBED6P86452 979 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 MAPK7Q13164 816 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 FBXW10Q5XX13 1052 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 B3GNT9Q6UX72 402 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 TRIM59Q8IWR1 403 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 MS4A14Q96JA4 679 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 PPP1R16BQ96T49 567 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 GOLPH3Q9H4A6 298 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 TMCO5BA8MYB1 307 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 AGPSO00116 658 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 TLR2O60603 784 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 CLSTN1O94985 981 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 FGFR1OPO95684 399 aaKnown RBP8.3□□□□□ -1.08
TRIM55-202ENST00000315962 CCND2P30279 289 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 CBWD6Q4V339 395 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 SEZ6Q53EL9 994 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 CBWD3Q5JTY5 395 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 CBWD5Q5RIA9 395 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 EPM2AIP1Q7L775 607 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-202ENST00000315962 BSNDQ8WZ55 320 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 ERGIC2Q96RQ1 377 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 JPH1Q9HDC5 661 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-202ENST00000315962 ACP6Q9NPH0 428 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 WDR64B1ANS9 1081 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 ZEB2O60315 1214 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 IREB2P48200 963 aaKnown RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 ACTR2P61160 394 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 PDCLQ13371 301 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 LMBRD2Q68DH5 695 aaPredicted RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GPATCH11Q8N954 259 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 COPS5Q92905 334 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 MOV10L1Q9BXT6 1211 aaKnown RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 SPATC1LQ9H0A9 340 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 PORCNQ9H237 461 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 EFCC1Q9HA90 598 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 AGPAT3Q9NRZ7 376 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 TBC1D22BQ9NU19 505 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 CHORDC1Q9UHD1 332 aaPredicted RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 SALL4Q9UJQ4 1053 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 PACSIN2Q9UNF0 486 aaPredicted RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 PCDHA10Q9Y5I2 948 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 ZMYM2Q9UBW7 1377 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GOLGA6CA6NDK9 693 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 POTEB2H3BUK9 544 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 CSDE1O75534 798 aaKnown RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GJB1P08034 283 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GOLGA6DP0CG33 693 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 KCNA2P16389 499 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GCLMP48507 274 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GTF2A1P52655 376 aaPredicted RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 KIF11P52732 1056 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GRM1Q13255 1194 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 TRADDQ15628 312 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 ARHGAP44Q17R89 818 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 HAUS6Q7Z4H7 955 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 FAM186BQ8IYM0 893 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 BAP1Q92560 729 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 SLC35C1Q96A29 364 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 ARL8AQ96BM9 186 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 PACSIN1Q9BY11 444 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 IFIH1Q9BYX4 1025 aaKnown RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GBP3Q9H0R5 595 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 CENPHQ9H3R5 247 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 TYW1Q9NV66 732 aaKnown RBP8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GOLGA6AQ9NYA3 693 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 PSD3Q9NYI0 1048 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 GCNT4Q9P109 453 aa8.29□□□□□ -1.08
TRIM55-202ENST00000315962 ZC3H4Q9UPT8 1303 aaKnown RBP8.28□□□□□ -1.08
TRIM55-202ENST00000315962 GOLGA6BA6NDN3 693 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 ANKRD63C9JTQ0 380 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 CALUO43852 315 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-202ENST00000315962 IPO7O95373 1038 aaKnown RBP8.28□□□□□ -1.08
TRIM55-202ENST00000315962 CALCAP01258 141 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 KRT14P02533 472 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 IVLP07476 585 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 EPB41P11171 864 aaKnown RBP8.28□□□□□ -1.08
TRIM55-202ENST00000315962 HARSP12081 509 aaKnown RBP8.28□□□□□ -1.08
TRIM55-202ENST00000315962 GJA5P36382 358 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 USP8P40818 1118 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 PPP1R2P41236 205 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 GUCY2FP51841 1108 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 PSMC5P62195 406 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 GNGT1P63211 74 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 DRP2Q13474 957 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 TRIM14Q14142 442 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 EXOC3L4Q17RC7 722 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms