RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 XRCC4Q13426 336 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 UBE2SQ16763 222 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 QRICH1Q2TAL8 776 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 CDAN1Q8IWY9 1227 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 TSGA10Q9BZW7 698 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.59□□□□□ -1.04
CNOT4-201ENST00000315544 LAMA3Q16787 3333 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 POTEB3A0JP26 581 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 PALMO75781 387 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 KIF4AO95239 1232 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 LDHBP07195 334 aaKnown RBP8.58□□□□□ -1.04
CNOT4-201ENST00000315544 VEGFBP49765 207 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 PPIL2Q13356 520 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 POTEBQ6S5H4 581 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 PRELID2Q8N945 189 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 JADE2Q9NQC1 790 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.58□□□□□ -1.04
CNOT4-201ENST00000315544 KANSL3Q9P2N6 904 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 BICDL2A1A5D9 508 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 POTEFA5A3E0 1075 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 CA12O43570 354 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 CNMDO75829 334 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 PIM1P11309 404 aaPredicted RBP8.58□□□□□ -1.04
CNOT4-201ENST00000315544 DLG4P78352 724 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 C10orf76Q5T2E6 689 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 VSTM1Q6UX27 236 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 ANKRD23Q86SG2 305 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 PTPN18Q99952 460 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 UBIAD1Q9Y5Z9 338 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 TCRBV7S2A1N4TA0A589 114 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 TULP1O00294 542 aaPredicted RBP8.58□□□□□ -1.04
CNOT4-201ENST00000315544 N4BP3O15049 544 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 KRT14P02533 472 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 EPHB4P54760 987 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 INHBEP58166 350 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 FKBP3Q00688 224 aaKnown RBP8.58□□□□□ -1.04
CNOT4-201ENST00000315544 NFXL1Q6ZNB6 911 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 BNIPLQ7Z465 357 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 MAPKAPK5Q8IW41 473 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 WNK4Q96J92 1243 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 ZSWIM1Q9BR11 485 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 PRO3102Q9H379 93 aa8.58□□□□□ -1.04
CNOT4-201ENST00000315544 BIN2Q9UBW5 565 aaPredicted RBP8.58□□□□□ -1.04
CNOT4-201ENST00000315544 ZMYND8Q9ULU4 1186 aaPredicted RBP8.58□□□□□ -1.04
CNOT4-201ENST00000315544 PTPRJQ12913 1337 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 DOCK4Q8N1I0 1966 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 CITO14578 2027 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 PLCB4Q15147 1175 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 KNOP1Q1ED39 458 aaKnown RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 SPRYD7Q5W111 196 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 SPTY2D1Q68D10 685 aaPredicted RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 RGS9BPQ6ZS82 235 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 REXO1Q8N1G1 1221 aaKnown RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 ZNF592Q92610 1267 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 ZNF516Q92618 1163 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 PGM2Q96G03 612 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 FGD4Q96M96 766 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 MORF4L1Q9UBU8 362 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 HOOK1Q9UJC3 728 aaKnown RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 SHROOM3Q8TF72 1996 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 SCN10AQ9Y5Y9 1956 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 MROH7Q68CQ1 1323 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 GSRP00390 522 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 CAPNS1P04632 268 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 TCP1P17987 556 aaKnown RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 CTNNA1P35221 906 aaKnown RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 PTPN7P35236 360 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 STAT3P40763 770 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 NLRP5P59047 1200 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 CREB5Q02930 508 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 CPLX2Q6PUV4 134 aaKnown RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 ATG14Q6ZNE5 492 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 NUP133Q8WUM0 1156 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 SEMA4DQ92854 862 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 MFSD14AQ96MC6 490 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 ZBTB12Q9Y330 459 aaPredicted RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 ZBTB42B2RXF5 422 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 KIF5CO60282 957 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 PIGRP01833 764 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 CYP1A1P04798 512 aaPredicted RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 CHRM1P11229 460 aaPredicted RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 ARSEP51690 589 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 PDE4DQ08499 809 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 NAA35Q5VZE5 725 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 CTCFLQ8NI51 663 aaPredicted RBP8.57□□□□□ -1.04
CNOT4-201ENST00000315544 EPN3Q9H201 632 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 KCND2Q9NZV8 630 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 TMX2Q9Y320 296 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 COL4A2P08572 1712 aa8.57□□□□□ -1.04
CNOT4-201ENST00000315544 KIF26AQ9ULI4 1882 aaPredicted RBP8.56□□□□□ -1.04
CNOT4-201ENST00000315544 CTAGE15A4D2H0 777 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 ATP2A1O14983 1001 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 EYA4O95677 639 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 SHBGP04278 402 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 PLA2G4BP0C869 781 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 CTAGE8P0CG41 777 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 ATP4AP20648 1035 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 LSP1P33241 339 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms