RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 DENND3A2RUS2 1198 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 SCP2P22307 547 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 HNRNPH3P31942 346 aaKnown RBP18.31■□□□□ 0.52
CLCF1-201ENST00000312438 SOX10P56693 466 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 INHBEP58166 350 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 CDK17Q00537 523 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 DCAF17Q5H9S7 520 aaPredicted RBP18.31■□□□□ 0.52
CLCF1-201ENST00000312438 TCERG1LQ5VWI1 586 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 TAPT1Q6NXT6 567 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 WDR59Q6PJI9 974 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 MAP4K3Q8IVH8 894 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 CHP1Q99653 195 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 POLR3FQ9H1D9 316 aaPredicted RBP18.31■□□□□ 0.52
CLCF1-201ENST00000312438 PLAGL2Q9UPG8 496 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 PAXBP1Q9Y5B6 917 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 KIAA1217Q5T5P2 1943 aa18.31■□□□□ 0.52
CLCF1-201ENST00000312438 RBM47A0AV96 593 aaKnown RBP18.3■□□□□ 0.52
CLCF1-201ENST00000312438 SLC15A5A6NIM6 579 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 EPHB6O15197 1021 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 SLC26A2P50443 739 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 TERF1P54274 439 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 LAMC2Q13753 1193 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 PPP2R5AQ15172 486 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 CACNA2D4Q7Z3S7 1137 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 EXOC8Q8IYI6 725 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 CRACR2AQ9BSW2 395 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 NUCKS1Q9H1E3 243 aaKnown RBP18.3■□□□□ 0.52
CLCF1-201ENST00000312438 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.3■□□□□ 0.52
CLCF1-201ENST00000312438 SLC5A4Q9NY91 659 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 ARL2P36404 184 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 XXYLT1Q8NBI6 393 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 COPS5Q92905 334 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 KCNN1Q92952 543 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 DESI2Q9BSY9 194 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 LSM14BQ9BX40 385 aaKnown RBP18.3■□□□□ 0.52
CLCF1-201ENST00000312438 SMARCAD1Q9H4L7 1026 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 CEP72Q9P209 647 aa18.3■□□□□ 0.52
CLCF1-201ENST00000312438 EPN1Q9Y6I3 576 aaPredicted RBP18.3■□□□□ 0.52
CLCF1-201ENST00000312438 EMSYQ7Z589 1322 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 GTPBP10A4D1E9 387 aaKnown RBP18.29■□□□□ 0.52
CLCF1-201ENST00000312438 IGF2BP3O00425 579 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLCF1-201ENST00000312438 MAPK13O15264 365 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 NOL4O94818 638 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 CNGA1P29973 690 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 EXOC3L4Q17RC7 722 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 CCDC170Q8IYT3 715 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 TMEM143Q96AN5 459 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 KIFC3Q9BVG8 833 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 PCIF1Q9H4Z3 704 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 PLCB1Q9NQ66 1216 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 ARHGAP28Q9P2N2 729 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 CPA4Q9UI42 421 aa18.29■□□□□ 0.52
CLCF1-201ENST00000312438 MAFO75444 373 aaPredicted RBP18.28■□□□□ 0.52
CLCF1-201ENST00000312438 SNAI1O95863 264 aaPredicted RBP18.28■□□□□ 0.52
CLCF1-201ENST00000312438 KRT13P13646 458 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 BRDTQ58F21 947 aaPredicted RBP18.28■□□□□ 0.52
CLCF1-201ENST00000312438 GBP6Q6ZN66 633 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 INTS8Q75QN2 995 aaKnown RBP18.28■□□□□ 0.52
CLCF1-201ENST00000312438 RRAGAQ7L523 313 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 RDH13Q8NBN7 331 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 ATP8B4Q8TF62 1192 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 BAP1Q92560 729 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 MAML3Q96JK9 1138 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 CBWD1Q9BRT8 395 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 HSPBP1Q9NZL4 362 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 PASKQ96RG2 1323 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 NDUFA10O95299 355 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 GH1P01241 217 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 NAMPTP43490 491 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 BFSP1Q12934 665 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 TAF1CQ15572 869 aaPredicted RBP18.28■□□□□ 0.52
CLCF1-201ENST00000312438 TMEM63BQ5T3F8 832 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 MSL3Q8N5Y2 521 aaKnown RBP18.28■□□□□ 0.52
CLCF1-201ENST00000312438 KIF18AQ8NI77 898 aa18.28■□□□□ 0.52
CLCF1-201ENST00000312438 SYN2Q92777 582 aaPredicted RBP18.28■□□□□ 0.52
CLCF1-201ENST00000312438 LRRC53A6NM62 1247 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 TISP43B9A030 160 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 SLC10A3P09131 477 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 GLRA2P23416 452 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 PON1P27169 355 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 CYLC1P35663 651 aaPredicted RBP18.27■□□□□ 0.52
CLCF1-201ENST00000312438 POLR2FP61218 127 aaKnown RBP18.27■□□□□ 0.52
CLCF1-201ENST00000312438 ETF1P62495 437 aaKnown RBP18.27■□□□□ 0.52
CLCF1-201ENST00000312438 ARHGAP1Q07960 439 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 PDXDC1Q6P996 788 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 ZNF592Q92610 1267 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 EMID1Q96A84 441 aaPredicted RBP18.27■□□□□ 0.52
CLCF1-201ENST00000312438 TINF2Q9BSI4 451 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 KATNBL1Q9H079 304 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 ABHD16BQ9H3Z7 469 aa18.27■□□□□ 0.52
CLCF1-201ENST00000312438 NHEJ1Q9H9Q4 299 aaPredicted RBP18.27■□□□□ 0.52
CLCF1-201ENST00000312438 ADGRA3Q8IWK6 1321 aa18.27■□□□□ 0.51
CLCF1-201ENST00000312438 ADGRA2Q96PE1 1338 aa18.27■□□□□ 0.51
CLCF1-201ENST00000312438 ANKRD63C9JTQ0 380 aa18.26■□□□□ 0.51
CLCF1-201ENST00000312438 GAS2O43903 313 aaKnown RBP18.26■□□□□ 0.51
CLCF1-201ENST00000312438 SLC9A1P19634 815 aa18.26■□□□□ 0.51
CLCF1-201ENST00000312438 MARK3P27448 753 aa18.26■□□□□ 0.51
CLCF1-201ENST00000312438 ADSSP30520 456 aa18.26■□□□□ 0.51
CLCF1-201ENST00000312438 PLCB4Q15147 1175 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms