RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 HOOK1Q9UJC3 728 aaKnown RBP19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 DARSP14868 501 aaKnown RBP19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 CSF2RAP15509 400 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 GAP43P17677 238 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 GLRA2P23416 452 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 ZNF131P52739 623 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 TMEM62Q0P6H9 643 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 PAK2Q13177 524 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 DHX8Q14562 1220 aaKnown RBP19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 ARSHQ5FYA8 562 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 LRRC15Q8TF66 581 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 SPIRE2Q8WWL2 714 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 DDX12PQ92771 950 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 SCLYQ96I15 445 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 NLRP4Q96MN2 994 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 IFIH1Q9BYX4 1025 aaKnown RBP19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 SEL1LQ9UBV2 794 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 GINS2Q9Y248 185 aa19.8■□□□□ 0.76
SSSCA1-201ENST00000309328 RPS6KA5O75582 802 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 BAIAP3O94812 1187 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 FAM13AO94988 1023 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 ZNF202O95125 648 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 SRGAP2CP0DJJ0 459 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 PLS3P13797 630 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 MAGEA10P43363 369 aaPredicted RBP19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 PTENP60484 403 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 NCBP1Q09161 790 aaKnown RBP19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 PLEKHG4Q58EX7 1191 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 CDCA2Q69YH5 1023 aaPredicted RBP19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 CNKSR3Q6P9H4 555 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 MAEAQ7L5Y9 396 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 CNNM3Q8NE01 707 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 DEPTORQ8TB45 409 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 KCNN1Q92952 543 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 TIGD1Q96MW7 591 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 OSMRQ99650 979 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 REEP2Q9BRK0 252 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 NTPCRQ9BSD7 190 aaKnown RBP19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 GPRC5CQ9NQ84 441 aa19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 RNF216Q9NWF9 866 aaPredicted RBP19.79■□□□□ 0.76
SSSCA1-201ENST00000309328 A0A087WZ62 844 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 LRRIQ4A6NIV6 560 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 ACTN4O43707 911 aaKnown RBP19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 NBNO60934 754 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 GHRP10912 638 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 BMP8BP34820 402 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 MDM2Q00987 491 aaPredicted RBP19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 CAPSQ13938 189 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 GIT2Q14161 759 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 LPIN1Q14693 890 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 MBTPS1Q14703 1052 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 CCDC65Q8IXS2 484 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 ELOA2Q8IYF1 753 aaPredicted RBP19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 ASAP3Q8TDY4 903 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 PRIMPOLQ96LW4 560 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 GDF15Q99988 308 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 C7orf25Q9BPX7 421 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 FDXACB1Q9BRP7 624 aaPredicted RBP19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 TRIM9Q9C026 710 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 IFT122Q9HBG6 1241 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 TNRC18O15417 2968 aaPredicted RBP19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 ARID2Q68CP9 1835 aa19.78■□□□□ 0.76
SSSCA1-201ENST00000309328 TRIP12Q14669 1992 aaPredicted RBP19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 ABHD14A-ACY1A0A1B0GW23 586 aa19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 KINO60870 393 aaKnown RBP19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 PRPF40AO75400 957 aaKnown RBP19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 MAPTP10636 758 aaKnown RBP19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 MAPK7Q13164 816 aa19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 IKBKEQ14164 716 aa19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 KRBA2Q6ZNG9 492 aa19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 FMR1NBQ8N0W7 255 aaPredicted RBP19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 DAW1Q8N136 415 aa19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 GOLPH3LQ9H4A5 285 aa19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 CHST12Q9NRB3 414 aa19.77■□□□□ 0.76
SSSCA1-201ENST00000309328 TANC1Q9C0D5 1861 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 PVALEFA0A1B0GWK0 134 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 FRMD3A2A2Y4 597 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 MYMKA6NI61 221 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 FGBP02675 491 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 AXLP30530 894 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 NPTX2P47972 431 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 LONRF3Q496Y0 759 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 PRPF38BQ5VTL8 546 aaKnown RBP19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 DEFB128Q7Z7B8 93 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 KSR1Q8IVT5 923 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 ENGASEQ8NFI3 743 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 CCDC47Q96A33 483 aaKnown RBP19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 UBE2OQ9C0C9 1292 aaKnown RBP19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 TMEM134Q9H6X4 195 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 KMT5AQ9NQR1 393 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 PRMT7Q9NVM4 692 aaPredicted RBP19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 SERTAD1Q9UHV2 236 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 PADI3Q9ULW8 664 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 PDE4DIPQ5VU43 2346 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 TCHHQ07283 1943 aa19.76■□□□□ 0.75
SSSCA1-201ENST00000309328 A0A1W2PPC1 479 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 CCDC169A6NNP5 214 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 ERLIN2O94905 339 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 PEX3P56589 373 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 ASIC1P78348 528 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms