RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TAAR1Q96RJ0 339 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 MMRN2Q9H8L6 949 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 ZNF408Q9H9D4 720 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 RGL1Q9NZL6 768 aa11.23□□□□□ -0.61
APOBEC3F-201ENST00000308521 MYH10P35580 1976 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 HMGB1P1B2RPK0 211 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 NKRFO15226 690 aaKnown RBP eCLIP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 NCK2O43639 380 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 GLI1P08151 1106 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 CARSP49589 748 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 Q4G0T1 1027 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 ZC3H12AQ5D1E8 599 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 HGSNATQ68CP4 663 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 SNRNP48Q6IEG0 339 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 UNC13DQ70J99 1090 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 TRMT1LQ7Z2T5 733 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 MAB21L3Q8N8X9 362 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 RNPC3Q96LT9 517 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 MBOAT7Q96N66 472 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 SLC39A2Q9NP94 309 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 LUC7LQ9NQ29 371 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 FAM207AQ9NSI2 230 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 EHD2Q9NZN4 543 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 PPP2R3BQ9Y5P8 575 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 CES2O00748 559 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 HEXIM1O94992 359 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 MYCLP12524 364 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 SPIRE1Q08AE8 756 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 TMEM132BQ14DG7 1078 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 PTGISQ16647 500 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 TTC19Q6DKK2 380 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 LRIG3Q6UXM1 1119 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 CATSPER3Q86XQ3 398 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 SLFN12Q8IYM2 578 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 RAD54LQ92698 747 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 CDCA5Q96FF9 252 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 WDR11Q9BZH6 1224 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 ATP6V0A4Q9HBG4 840 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 EPB41L5Q9HCM4 733 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 GINM1Q9NU53 330 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 TMOD4Q9NZQ9 345 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 NFU1Q9UMS0 254 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 CAPN7Q9Y6W3 813 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 ZBTB39O15060 712 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 PPP1R37O75864 691 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 MYBP10242 640 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 EZRP15311 586 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 NR1D1P20393 614 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 PAX7P23759 505 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 CIITAP33076 1130 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 MRPS25P82663 173 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 COG2Q14746 738 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 NAB2Q15742 525 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 CEP55Q53EZ4 464 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 NAA35Q5VZE5 725 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 SH2D3CQ8N5H7 860 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 C3orf20Q8ND61 904 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 GLIS3Q8NEA6 775 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 SYTL5Q8TDW5 730 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 ZNF473Q8WTR7 871 aaKnown RBP11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 DDX12PQ92771 950 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 ATP6V1G3Q96LB4 118 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 TBC1D7Q9P0N9 293 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 CSADQ9Y600 493 aa11.22□□□□□ -0.61
APOBEC3F-201ENST00000308521 GLTPD2A6NH11 291 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 KRT14P02533 472 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 SERPING1P05155 500 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 CYP3A4P08684 503 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 FAM153BP0C7A2 387 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 ITGB5P18084 799 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 SLC8A1P32418 973 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 HSPA9P38646 679 aaKnown RBP11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 MDH1P40925 334 aaKnown RBP11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 HSD17B4P51659 736 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 GFPT1Q06210 699 aaPredicted RBP11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 PSMD2Q13200 908 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 BAATQ14032 418 aaPredicted RBP11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 CTTNQ14247 550 aaKnown RBP11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 FAM153CQ494X1 144 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 MAP1SQ66K74 1059 aaPredicted RBP11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 GADL1Q6ZQY3 521 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 CATSPERGQ6ZRH7 1159 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 TAX1BP1Q86VP1 789 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 PSMB7Q99436 277 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 NAP1L4Q99733 375 aaKnown RBP11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 RABEP2Q9H5N1 569 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 BCAS3Q9H6U6 928 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 RNF146Q9NTX7 359 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 CEP72Q9P209 647 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 FAM153AQ9UHL3 310 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.61
APOBEC3F-201ENST00000308521 C19orf81C9J6K1 198 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 TRAF5O00463 557 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 SPATA31C1P0DKV0 1188 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 ATP1A2P50993 1020 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 GUCY2DQ02846 1103 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 PABPC4Q13310 644 aaKnown RBP eCLIP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms