RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 PI4K2AQ9BTU6 479 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 SEMA6BQ9H3T3 888 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 STK24Q9Y6E0 443 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 FGFR2P21802 821 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 PLA2G4FQ68DD2 849 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 SWSAP1Q6NVH7 229 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 TTI2Q6NXR4 508 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 CDR2LQ86X02 465 aaPredicted RBP15.9■□□□□ 0.14
CDH23-202ENST00000299366 NKX2-3Q8TAU0 364 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 ATP6V0A1Q93050 837 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 INTS2Q9H0H0 1204 aaKnown RBP15.9■□□□□ 0.14
CDH23-202ENST00000299366 KCND1Q9NSA2 647 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 ARHGAP20Q9P2F6 1191 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 PNMA2Q9UL42 364 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 MAP2K7O14733 419 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
CDH23-202ENST00000299366 CCDC137Q6PK04 289 aaKnown RBP15.9■□□□□ 0.14
CDH23-202ENST00000299366 TRIM59Q8IWR1 403 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 ZBTB8OSQ8IWT0 167 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 PROM2Q8N271 834 aa15.9■□□□□ 0.14
CDH23-202ENST00000299366 HMGB1P1B2RPK0 211 aaPredicted RBP15.89■□□□□ 0.13
CDH23-202ENST00000299366 ACOT2P49753 483 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 VAMP7P51809 220 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 HERVK_113P62684 666 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 PPP2R5EQ16537 467 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 NBPF9Q3BBW0 867 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 MAP7D1Q3KQU3 841 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 FAM47CQ5HY64 1035 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 CDC42EP5Q6NZY7 148 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 HSPH1Q92598 858 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 BTBD6Q96KE9 485 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDH23-202ENST00000299366 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDH23-202ENST00000299366 FNDC3AQ9Y2H6 1198 aaKnown RBP15.89■□□□□ 0.13
CDH23-202ENST00000299366 A0A0G2JND7 137 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 RNF225M0QZC1 329 aaPredicted RBP15.89■□□□□ 0.13
CDH23-202ENST00000299366 CIB2O75838 187 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 GRB10Q13322 594 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 PPP2R5AQ15172 486 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 NXNQ6DKJ4 435 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 NLRP14Q86W24 1093 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 CCNYQ8ND76 341 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 SLC35G2Q8TBE7 412 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 IL17RBQ9NRM6 502 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 GABBR1Q9UBS5 961 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 INHBAP08476 426 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 HADHQ16836 314 aaKnown RBP15.89■□□□□ 0.13
CDH23-202ENST00000299366 NAALADL2Q58DX5 795 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 RNF207Q6ZRF8 634 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 PTF1AQ7RTS3 328 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 ZNF564Q8TBZ8 553 aaPredicted RBP15.89■□□□□ 0.13
CDH23-202ENST00000299366 HNRNPLLQ8WVV9 542 aaKnown RBP15.89■□□□□ 0.13
CDH23-202ENST00000299366 SREK1Q8WXA9 508 aaKnown RBP15.89■□□□□ 0.13
CDH23-202ENST00000299366 C7orf25Q9BPX7 421 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 FIS1Q9Y3D6 152 aa15.89■□□□□ 0.13
CDH23-202ENST00000299366 TNNC2P02585 160 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 HAUS6Q7Z4H7 955 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 TTC17Q96AE7 1141 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 ATP6V1G3Q96LB4 118 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 RUNDC3BQ96NL0 473 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 TMEM206Q9H813 350 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 AKT3Q9Y243 479 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 USP20Q9Y2K6 914 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 HEY1Q9Y5J3 304 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 RASA4BC9J798 803 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 RASA4O43374 803 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 PRELPP51888 382 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 PSMC6P62333 389 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 GPC5P78333 572 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 TNFAIP1Q13829 316 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 SEZ6Q53EL9 994 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 CPA5Q8WXQ8 436 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 MSTO1Q9BUK6 570 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 PREX1Q8TCU6 1659 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 GMNCA6NCL1 334 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 CLDN3O15551 220 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 BRAFP15056 766 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 GRK7Q8WTQ7 553 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 MTMR8Q96EF0 704 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 ZNF512BQ96KM6 892 aaPredicted RBP15.88■□□□□ 0.13
CDH23-202ENST00000299366 TRPC5Q9UL62 973 aaPredicted RBP15.88■□□□□ 0.13
CDH23-202ENST00000299366 PLAGL2Q9UPG8 496 aa15.88■□□□□ 0.13
CDH23-202ENST00000299366 ZNF233A6NK53 670 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 CCDC188H7C350 402 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 CAPN9O14815 690 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 CYTH3O43739 400 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 PPP1R37O75864 691 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 NPR1P16066 1061 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 ECE1P42892 770 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 IL9RQ01113 521 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 LDHDQ86WU2 507 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 CATSPER3Q86XQ3 398 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 MAIP1Q8WWC4 291 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 N4BP2L2Q92802 583 aaPredicted RBP15.87■□□□□ 0.13
CDH23-202ENST00000299366 CYTH2Q99418 400 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 FAM167BQ9BTA0 163 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 CSADQ9Y600 493 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 ZHX2Q9Y6X8 837 aa15.87■□□□□ 0.13
CDH23-202ENST00000299366 PMS2P54278 862 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms