RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 SYT10Q6XYQ8 523 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 CACNA2D4Q7Z3S7 1137 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 C12orf56Q8IXR9 622 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 TMEM161BQ8NDZ6 487 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 ACRBPQ8NEB7 543 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 MYRIPQ8NFW9 859 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 TMEM174Q8WUU8 243 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 BSNDQ8WZ55 320 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 BAP1Q92560 729 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 PARK7Q99497 189 aaKnown RBP15.6■□□□□ 0.09
C9orf3-202ENST00000297979 NMRK2Q9NPI5 230 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 KMT5AQ9NQR1 393 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 PLAGL2Q9UPG8 496 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 EPN1Q9Y6I3 576 aaPredicted RBP15.6■□□□□ 0.09
C9orf3-202ENST00000297979 NDUFA10O95299 355 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 SOX10P56693 466 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 SNRPFP62306 86 aaKnown RBP15.6■□□□□ 0.09
C9orf3-202ENST00000297979 AFAP1L1Q8TED9 768 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 PCYT2Q99447 389 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 EXOC7Q9UPT5 735 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 PLXNA1Q9UIW2 1896 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 UQCRHLA0A096LP55 91 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 EXOC3O60645 756 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 UQCRHP07919 91 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 TCF7P36402 384 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-202ENST00000297979 POLGP54098 1239 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-202ENST00000297979 EMC2Q15006 297 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 CELF3Q5SZQ8 465 aaKnown RBP15.59■□□□□ 0.09
C9orf3-202ENST00000297979 RRAGAQ7L523 313 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 NTPCRQ9BSD7 190 aaKnown RBP15.59■□□□□ 0.09
C9orf3-202ENST00000297979 NIFKQ9BYG3 293 aaKnown RBP15.59■□□□□ 0.09
C9orf3-202ENST00000297979 LRRC53A6NM62 1247 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 RIOK3O14730 519 aaKnown RBP15.59■□□□□ 0.09
C9orf3-202ENST00000297979 NOL4O94818 638 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 STAT5BP51692 787 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 CST9Q5W186 159 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 PDXDC1Q6P996 788 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 CCDC170Q8IYT3 715 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 ABRAQ8N0Z2 381 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 KIFC3Q9BVG8 833 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 POLR3FQ9H1D9 316 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-202ENST00000297979 TBX20Q9UMR3 447 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 PHLPP2Q6ZVD8 1323 aa15.59■□□□□ 0.09
C9orf3-202ENST00000297979 ADORA2AP29274 412 aa15.58■□□□□ 0.09
C9orf3-202ENST00000297979 CYLC1P35663 651 aaPredicted RBP15.58■□□□□ 0.09
C9orf3-202ENST00000297979 PPP2R5AQ15172 486 aa15.58■□□□□ 0.09
C9orf3-202ENST00000297979 ZNF792Q3KQV3 632 aa15.58■□□□□ 0.09
C9orf3-202ENST00000297979 ARMCX2Q7L311 632 aa15.58■□□□□ 0.09
C9orf3-202ENST00000297979 MAP4K3Q8IVH8 894 aa15.58■□□□□ 0.09
C9orf3-202ENST00000297979 IFT74Q96LB3 600 aa15.58■□□□□ 0.09
C9orf3-202ENST00000297979 NUCKS1Q9H1E3 243 aaKnown RBP15.58■□□□□ 0.09
C9orf3-202ENST00000297979 NHEJ1Q9H9Q4 299 aaPredicted RBP15.58■□□□□ 0.09
C9orf3-202ENST00000297979 NRBP2Q9NSY0 501 aa15.58■□□□□ 0.09
C9orf3-202ENST00000297979 IVNS1ABPQ9Y6Y0 642 aa15.58■□□□□ 0.09
C9orf3-202ENST00000297979 TRPM7Q96QT4 1865 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 DENND3A2RUS2 1198 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 STRNO43815 780 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 EXOC3L4Q17RC7 722 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 CCDC62Q6P9F0 684 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 GPR20Q99678 358 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 PTPN18Q99952 460 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 GANQ9H2C0 597 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 DHX33Q9H6R0 707 aaKnown RBP15.58■□□□□ 0.08
C9orf3-202ENST00000297979 AZI2Q9H6S1 392 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 LZTFL1Q9NQ48 299 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 PLCB1Q9NQ66 1216 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 DNAI1Q9UI46 699 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 GTPBP10A4D1E9 387 aaKnown RBP15.58■□□□□ 0.08
C9orf3-202ENST00000297979 TISP43B9A030 160 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 NOP56O00567 594 aaKnown RBP15.58■□□□□ 0.08
C9orf3-202ENST00000297979 POLR2FP61218 127 aaKnown RBP15.58■□□□□ 0.08
C9orf3-202ENST00000297979 GBP6Q6ZN66 633 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 CBWD1Q9BRT8 395 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 NLRC4Q9NPP4 1024 aa15.58■□□□□ 0.08
C9orf3-202ENST00000297979 H0YCG3 227 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 RFC5P40937 340 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 HUNKP57058 714 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 TTLL4Q14679 1199 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 SCFD2Q8WU76 684 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 SLC7A3Q8WY07 619 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 FAM167AQ96KS9 214 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 CEP89Q96ST8 783 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 PCIF1Q9H4Z3 704 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 HSPBP1Q9NZL4 362 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 ITGBL1O95965 494 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-202ENST00000297979 TXNP10599 105 aaKnown RBP15.57■□□□□ 0.08
C9orf3-202ENST00000297979 ABCD1P33897 745 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 BFSP1Q12934 665 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 FAM110CQ1W6H9 321 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 HSDL1Q3SXM5 330 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 ARHGAP29Q52LW3 1261 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 XXYLT1Q8NBI6 393 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 REXO2Q9Y3B8 237 aaKnown RBP15.57■□□□□ 0.08
C9orf3-202ENST00000297979 ADGRA3Q8IWK6 1321 aa15.57■□□□□ 0.08
C9orf3-202ENST00000297979 A0A0U1RQJ8 604 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 LGR5O75473 907 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 KRT13P13646 458 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 SLC9A1P19634 815 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 PON1P27169 355 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 GNG11P61952 73 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms