RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 GOLGA8JA6NMD2 632 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 TACC1O75410 805 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 ADORA2AP29274 412 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 MARSP56192 900 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 ILDR2Q71H61 639 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 CAGE1Q8TC20 777 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 KCND1Q9NSA2 647 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 HSPBP1Q9NZL4 362 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 TBX20Q9UMR3 447 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 EIF4A3P38919 411 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 STAT1P42224 750 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 VAMP7P51809 220 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 SPRYD7Q5W111 196 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 PDXDC1Q6P996 788 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 ARMCX2Q7L311 632 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 PSPC1Q8WXF1 523 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 UBXN4Q92575 508 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 KIFC3Q9BVG8 833 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 PORCNQ9H237 461 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 ABT1Q9ULW3 272 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 DICER1Q9UPY3 1922 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 PHLPP2Q6ZVD8 1323 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 ZNF862O60290 1169 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 RGS20O76081 388 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 SERPING1P05155 500 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 TRIM49P0CI25 452 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 TRIM49CP0CI26 452 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 MAPK4P31152 587 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 MXI1P50539 228 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 IGBP1P78318 339 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 BFSP1Q12934 665 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 TFDP1Q14186 410 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 SPIRE2Q8WWL2 714 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 ZNF215Q9UL58 517 aaPredicted RBP14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 PLAGL2Q9UPG8 496 aa14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 BZW2Q9Y6E2 419 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-201ENST00000296122 LOC102724159A0A0B4J2E5 919 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 TGFB1I1O43294 461 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 PHACTR2O75167 634 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 FARP2O94887 1054 aaPredicted RBP14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 GH1P01241 217 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 DLATP10515 647 aaKnown RBP14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 PWP2Q15269 919 aaKnown RBP14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 PLEKHH3Q7Z736 793 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 PDCL3Q9H2J4 239 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 MACROD2A1Z1Q3 448 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 TMOD1P28289 359 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 KIF11P52732 1056 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 BIRC3Q13489 604 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 LAMC2Q13753 1193 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 SLFN12LQ6IEE8 588 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 ANKFY1Q9P2R3 1169 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 SIK3Q9Y2K2 1263 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 SLC45A1Q9Y2W3 748 aa14.34□□□□□ -0.11
PPP1CB-201ENST00000296122 CNGA1P29973 690 aa14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 MAPK7Q13164 816 aa14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 ARHGAP44Q17R89 818 aa14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 GPAT2Q6NUI2 795 aa14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 TMEM139Q8IV31 216 aa14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 DAW1Q8N136 415 aa14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 BRI3BPQ8WY22 251 aa14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 BBXQ8WY36 941 aaPredicted RBP14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 NAPGQ99747 312 aaPredicted RBP14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 NMRK2Q9NPI5 230 aa14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 MYO1AQ9UBC5 1043 aa14.33□□□□□ -0.11
PPP1CB-201ENST00000296122 TNNI1P19237 187 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 SCP2P22307 547 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 FMO5P49326 533 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 GTF2BQ00403 316 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 REXO1L1PQ8IX06 675 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 SAAL1Q96ER3 474 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 BCAS3Q9H6U6 928 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 KIAA1586Q9HCI6 787 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 MANSC4A6NHS7 340 aaPredicted RBP14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 ZNF233A6NK53 670 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 EIF3CLB5ME19 914 aaKnown RBP14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 SRGAP2CP0DJJ0 459 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 SLC9A1P19634 815 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 SOX10P56693 466 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 CYP27A1Q02318 531 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 CELF3Q5SZQ8 465 aaKnown RBP14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 SECISBP2LQ93073 1101 aaKnown RBP14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 EIF3CQ99613 913 aaKnown RBP14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 CBWD1Q9BRT8 395 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 IMPG2Q9BZV3 1241 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 VTA1Q9NP79 307 aa14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 DDX41Q9UJV9 622 aaKnown RBP14.33□□□□□ -0.12
PPP1CB-201ENST00000296122 FERP16591 822 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 GJA5P36382 358 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 SLC26A2P50443 739 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 WDR44Q5JSH3 913 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 SLC35C1Q96A29 364 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 FAM212AQ96EL1 285 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 GAS2O43903 313 aaKnown RBP14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 UCHL3P15374 230 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 GCLMP48507 274 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 SP2Q02086 613 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 NFIL3Q16649 462 aa14.32□□□□□ -0.12
PPP1CB-201ENST00000296122 IFI16Q16666 785 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms