RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 SUMF1Q8NBK3 374 aa11.82□□□□□ -0.52
USP41-201ENST00000292729 ADAMTS10Q9H324 1103 aa11.82□□□□□ -0.52
USP41-201ENST00000292729 CHST12Q9NRB3 414 aa11.82□□□□□ -0.52
USP41-201ENST00000292729 DLGAP2Q9P1A6 1054 aa11.82□□□□□ -0.52
USP41-201ENST00000292729 EPS15L1Q9UBC2 864 aa11.82□□□□□ -0.52
USP41-201ENST00000292729 CA14Q9ULX7 337 aa11.82□□□□□ -0.52
USP41-201ENST00000292729 AKT3Q9Y243 479 aa11.82□□□□□ -0.52
USP41-201ENST00000292729 MAFBQ9Y5Q3 323 aaPredicted RBP11.82□□□□□ -0.52
USP41-201ENST00000292729 PATJQ8NI35 1801 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 PRR5-ARHGAP8B1AHC4 643 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 DDX39AO00148 427 aaKnown RBP11.81□□□□□ -0.52
USP41-201ENST00000292729 SPTLC1O15269 473 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 PLEKHA8P1O95397 391 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 ATP4AP20648 1035 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 GBP2P32456 591 aaPredicted RBP11.81□□□□□ -0.52
USP41-201ENST00000292729 ARHGAP8P85298 464 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 ZNF528Q3MIS6 628 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 SPECC1Q5M775 1068 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 EFCAB12Q6NXP0 572 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 TMEM173Q86WV6 379 aaPredicted RBP11.81□□□□□ -0.52
USP41-201ENST00000292729 LINC01465Q8N7H1 131 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 SECISBP2LQ93073 1101 aaKnown RBP11.81□□□□□ -0.52
USP41-201ENST00000292729 FAM167AQ96KS9 214 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 KLHL5Q96PQ7 755 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 MYL10Q9BUA6 226 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 TRAIPQ9BWF2 469 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 LY9Q9HBG7 655 aa11.81□□□□□ -0.52
USP41-201ENST00000292729 WDR6Q9NNW5 1121 aaKnown RBP11.81□□□□□ -0.52
USP41-201ENST00000292729 DCNP07585 359 aaKnown RBP11.8□□□□□ -0.52
USP41-201ENST00000292729 GALTP07902 379 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 DARSP14868 501 aaKnown RBP11.8□□□□□ -0.52
USP41-201ENST00000292729 ZNF76P36508 570 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 CLCN3P51790 818 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 ANTXR2P58335 489 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 CDC42EP1Q00587 391 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
USP41-201ENST00000292729 ZNF746Q6NUN9 644 aaPredicted RBP11.8□□□□□ -0.52
USP41-201ENST00000292729 CASC1Q6TDU7 716 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 SMC5Q8IY18 1101 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 MB21D2Q8IYB1 491 aaPredicted RBP11.8□□□□□ -0.52
USP41-201ENST00000292729 SMAP1Q8IYB5 467 aaPredicted RBP11.8□□□□□ -0.52
USP41-201ENST00000292729 FEZF2Q8TBJ5 459 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 ANO3Q9BYT9 981 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 IL25Q9H293 177 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 NRDE2Q9H7Z3 1164 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 ARHGEF3Q9NR81 526 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 SLC2A4RGQ9NR83 387 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 TBC1D22BQ9NU19 505 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 NCDNQ9UBB6 729 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 SSX2IPQ9Y2D8 614 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 CLUHO75153 1309 aa11.8□□□□□ -0.52
USP41-201ENST00000292729 CCDC69A6NI79 296 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 DHX15O43143 795 aaKnown RBP11.79□□□□□ -0.52
USP41-201ENST00000292729 N4BP1O75113 896 aaKnown RBP11.79□□□□□ -0.52
USP41-201ENST00000292729 PSAPP07602 524 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 CNPP09543 421 aaKnown RBP11.79□□□□□ -0.52
USP41-201ENST00000292729 SREBF1P36956 1147 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 PHKA2P46019 1235 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 GPC3P51654 580 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 ATXN1P54253 815 aaKnown RBP11.79□□□□□ -0.52
USP41-201ENST00000292729 LMNB2Q03252 620 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 RNASELQ05823 741 aaKnown RBP11.79□□□□□ -0.52
USP41-201ENST00000292729 ST3GAL2Q16842 350 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 NOMO2Q5JPE7 1267 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 PPP1R18Q6NYC8 613 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 DCLRE1AQ6PJP8 1040 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 NFXL1Q6ZNB6 911 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 PJA1Q8NG27 643 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 GPR152Q8TDT2 470 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 RSAD2Q8WXG1 361 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 SHDQ96IW2 340 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 SCLT1Q96NL6 688 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 RTKNQ9BST9 563 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 GLT8D2Q9H1C3 349 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 MRPL17Q9NRX2 175 aaKnown RBP11.79□□□□□ -0.52
USP41-201ENST00000292729 TBC1D13Q9NVG8 400 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.79□□□□□ -0.52
USP41-201ENST00000292729 TCEAL9Q9UHQ7 104 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 FBXO4Q9UKT5 387 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 MYH15Q9Y2K3 1946 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 FRYLO94915 3013 aa11.79□□□□□ -0.52
USP41-201ENST00000292729 SPTBN2O15020 2390 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 CCDC195A0A1B0GUA6 201 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 IPO5O00410 1097 aaKnown RBP11.78□□□□□ -0.52
USP41-201ENST00000292729 LILRB3O75022 631 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 C1RP00736 705 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 ADH1AP07327 375 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 RAB27AP51159 221 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 STARD6P59095 220 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 B4GALNT3Q6L9W6 998 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 PLA2G4DQ86XP0 818 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 CMTR1Q8N1G2 835 aaKnown RBP11.78□□□□□ -0.52
USP41-201ENST00000292729 HDAC7Q8WUI4 952 aa11.78□□□□□ -0.52
USP41-201ENST00000292729 BCL7CQ8WUZ0 217 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms