RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 LRRC15Q8TF66 581 aa17.04■□□□□ 0.32
NCK1-201ENST00000288986 PRPF31Q8WWY3 499 aaKnown RBP17.04■□□□□ 0.32
NCK1-201ENST00000288986 ZNF668Q96K58 619 aaPredicted RBP17.04■□□□□ 0.32
NCK1-201ENST00000288986 CUEDC2Q9H467 287 aa17.04■□□□□ 0.32
NCK1-201ENST00000288986 STK17AQ9UEE5 414 aa17.04■□□□□ 0.32
NCK1-201ENST00000288986 CDY2AQ9Y6F7 541 aa17.04■□□□□ 0.32
NCK1-201ENST00000288986 SLC12A3P55017 1021 aa17.03■□□□□ 0.32
NCK1-201ENST00000288986 DPYDQ12882 1025 aa17.03■□□□□ 0.32
NCK1-201ENST00000288986 DPCR1Q3MIW9 517 aa17.03■□□□□ 0.32
NCK1-201ENST00000288986 GRAMD1CQ8IYS0 662 aa17.03■□□□□ 0.32
NCK1-201ENST00000288986 TRIML1Q8N9V2 468 aa17.03■□□□□ 0.32
NCK1-201ENST00000288986 PSPC1Q8WXF1 523 aaKnown RBP17.03■□□□□ 0.32
NCK1-201ENST00000288986 SCLT1Q96NL6 688 aa17.03■□□□□ 0.32
NCK1-201ENST00000288986 BPIFA3Q9BQP9 254 aa17.03■□□□□ 0.32
NCK1-201ENST00000288986 CELF4Q9BZC1 486 aaKnown RBP17.03■□□□□ 0.32
NCK1-201ENST00000288986 POLD4Q9HCU8 107 aa17.03■□□□□ 0.32
NCK1-201ENST00000288986 GPRC5CQ9NQ84 441 aa17.03■□□□□ 0.32
NCK1-201ENST00000288986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.02■□□□□ 0.32
NCK1-201ENST00000288986 FPGSQ05932 587 aa17.02■□□□□ 0.32
NCK1-201ENST00000288986 RAD51AP2Q09MP3 1159 aa17.02■□□□□ 0.32
NCK1-201ENST00000288986 TRAF7Q6Q0C0 670 aa17.02■□□□□ 0.32
NCK1-201ENST00000288986 DEFB128Q7Z7B8 93 aa17.02■□□□□ 0.32
NCK1-201ENST00000288986 KSR1Q8IVT5 923 aa17.02■□□□□ 0.32
NCK1-201ENST00000288986 NLRP7Q8WX94 980 aa17.02■□□□□ 0.32
NCK1-201ENST00000288986 RUSC1Q9BVN2 902 aa17.02■□□□□ 0.32
NCK1-201ENST00000288986 MAGEF1Q9HAY2 307 aa17.02■□□□□ 0.32
NCK1-201ENST00000288986 TRPV2Q9Y5S1 764 aa17.02■□□□□ 0.32
NCK1-201ENST00000288986 LAMA2P24043 3122 aaKnown RBP17.02■□□□□ 0.32
NCK1-201ENST00000288986 CDC42EP1Q00587 391 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 FAM26DQ5JW98 314 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 C1orf186Q6ZWK4 172 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 SV2BQ7L1I2 683 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 LUZP1Q86V48 1076 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 GPBP1Q86WP2 473 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 SMARCE1Q969G3 411 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 NLRP4Q96MN2 994 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 CDHR5Q9HBB8 845 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 KBTBD4Q9NVX7 518 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 MAN1B1Q9UKM7 699 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 COL4A3BPQ9Y5P4 624 aa17.02■□□□□ 0.31
NCK1-201ENST00000288986 GTPBP6O43824 516 aaPredicted RBP17.01■□□□□ 0.31
NCK1-201ENST00000288986 GPR32O75388 356 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 PARNO95453 639 aaKnown RBP17.01■□□□□ 0.31
NCK1-201ENST00000288986 MYL1P05976 194 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 SRGAP2CP0DJJ0 459 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 BMP6P22004 513 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 MAGEA10P43363 369 aaPredicted RBP17.01■□□□□ 0.31
NCK1-201ENST00000288986 MGAT3Q09327 533 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 LAMTOR4Q0VGL1 99 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 MORC3Q14149 939 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
NCK1-201ENST00000288986 MBTPS1Q14703 1052 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 PDLIM2Q96JY6 352 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 GSDMAQ96QA5 445 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 PPP1R9BQ96SB3 815 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 OSMRQ99650 979 aa17.01■□□□□ 0.31
NCK1-201ENST00000288986 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
NCK1-201ENST00000288986 RBAK-RBAKDNI3L0D1 243 aa17■□□□□ 0.31
NCK1-201ENST00000288986 BIN1O00499 593 aa17■□□□□ 0.31
NCK1-201ENST00000288986 NBNO60934 754 aa17■□□□□ 0.31
NCK1-201ENST00000288986 KRT18P05783 430 aaKnown RBP17■□□□□ 0.31
NCK1-201ENST00000288986 GHRP10912 638 aa17■□□□□ 0.31
NCK1-201ENST00000288986 AFMP43652 599 aa17■□□□□ 0.31
NCK1-201ENST00000288986 GPC3P51654 580 aa17■□□□□ 0.31
NCK1-201ENST00000288986 PPIGQ13427 754 aaKnown RBP eCLIP17■□□□□ 0.31
NCK1-201ENST00000288986 RPUSD2Q8IZ73 545 aaKnown RBP17■□□□□ 0.31
NCK1-201ENST00000288986 ZNF710Q8N1W2 664 aa17■□□□□ 0.31
NCK1-201ENST00000288986 NAT10Q9H0A0 1025 aaKnown RBP17■□□□□ 0.31
NCK1-201ENST00000288986 KCND2Q9NZV8 630 aa17■□□□□ 0.31
NCK1-201ENST00000288986 A0A087WZ62 844 aa17■□□□□ 0.31
NCK1-201ENST00000288986 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
NCK1-201ENST00000288986 ASAP2O43150 1006 aa17■□□□□ 0.31
NCK1-201ENST00000288986 SMC2O95347 1197 aa17■□□□□ 0.31
NCK1-201ENST00000288986 ACRP10323 421 aa17■□□□□ 0.31
NCK1-201ENST00000288986 RFC2P35250 354 aa17■□□□□ 0.31
NCK1-201ENST00000288986 ARL2P36404 184 aa17■□□□□ 0.31
NCK1-201ENST00000288986 CRYBB1P53674 252 aaPredicted RBP17■□□□□ 0.31
NCK1-201ENST00000288986 GPNMBQ14956 572 aa17■□□□□ 0.31
NCK1-201ENST00000288986 ARSHQ5FYA8 562 aa17■□□□□ 0.31
NCK1-201ENST00000288986 DHX40Q8IX18 779 aaKnown RBP17■□□□□ 0.31
NCK1-201ENST00000288986 RNF149Q8NC42 400 aa17■□□□□ 0.31
NCK1-201ENST00000288986 KIFAP3Q92845 792 aa17■□□□□ 0.31
NCK1-201ENST00000288986 FDXACB1Q9BRP7 624 aaPredicted RBP17■□□□□ 0.31
NCK1-201ENST00000288986 OSBPL7Q9BZF2 842 aa17■□□□□ 0.31
NCK1-201ENST00000288986 ADAMTS10Q9H324 1103 aa17■□□□□ 0.31
NCK1-201ENST00000288986 SFI1A8K8P3 1242 aa16.99■□□□□ 0.31
NCK1-201ENST00000288986 HIP1RO75146 1068 aa16.99■□□□□ 0.31
NCK1-201ENST00000288986 GUCY2CP25092 1073 aa16.99■□□□□ 0.31
NCK1-201ENST00000288986 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
NCK1-201ENST00000288986 FBXO47Q5MNV8 452 aa16.99■□□□□ 0.31
NCK1-201ENST00000288986 ASAP3Q8TDY4 903 aa16.99■□□□□ 0.31
NCK1-201ENST00000288986 STAMQ92783 540 aa16.99■□□□□ 0.31
NCK1-201ENST00000288986 ARID2Q68CP9 1835 aa16.99■□□□□ 0.31
NCK1-201ENST00000288986 CSDE1O75534 798 aaKnown RBP16.98■□□□□ 0.31
NCK1-201ENST00000288986 GLRA2P23416 452 aa16.98■□□□□ 0.31
NCK1-201ENST00000288986 CCDC173Q0VFZ6 552 aa16.98■□□□□ 0.31
NCK1-201ENST00000288986 TFDP1Q14186 410 aa16.98■□□□□ 0.31
NCK1-201ENST00000288986 DYMQ7RTS9 669 aa16.98■□□□□ 0.31
NCK1-201ENST00000288986 ZNF410Q86VK4 478 aa16.98■□□□□ 0.31
NCK1-201ENST00000288986 TMEM40Q8WWA1 233 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms