RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 LRRC53A6NM62 1247 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 INO80B-WBP1J3KQ70 363 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 CORO7P57737 925 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 GFPT1Q06210 699 aaPredicted RBP9.67□□□□□ -0.86
SMC2-201ENST00000286398 RUNX1T1Q06455 604 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 B4GALNT2Q8NHY0 566 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 CNBD2Q96M20 576 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 SIKE1Q9BRV8 207 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 APOL6Q9BWW8 343 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 INO80BQ9C086 356 aaPredicted RBP9.67□□□□□ -0.86
SMC2-201ENST00000286398 SENP1Q9P0U3 644 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 SUGT1Q9Y2Z0 365 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 GJA3Q9Y6H8 435 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 PHF20L1A8MW92 1017 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 ZNF189O75820 626 aaPredicted RBP9.67□□□□□ -0.86
SMC2-201ENST00000286398 ZNF18P17022 549 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 GPC5P78333 572 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 PDIA2Q13087 525 aaKnown RBP9.67□□□□□ -0.86
SMC2-201ENST00000286398 CRYMQ14894 314 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 CDO1Q16878 200 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 IMPG1Q17R60 797 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 SEC16BQ96JE7 1060 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 WDR24Q96S15 920 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 PRMT1Q99873 361 aaKnown RBP9.67□□□□□ -0.86
SMC2-201ENST00000286398 BEGAINQ9BUH8 593 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 WDR11Q9BZH6 1224 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 KLHL31Q9H511 634 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 SLC12A6Q9UHW9 1150 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 DNAJC12Q9UKB3 198 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 KIAA0232Q92628 1395 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 WDR7Q9Y4E6 1490 aa9.67□□□□□ -0.86
SMC2-201ENST00000286398 PCF11O94913 1555 aaKnown RBP9.67□□□□□ -0.86
SMC2-201ENST00000286398 SNX2O60749 519 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 PLA2G4BP0C869 781 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 SMARCA1P28370 1054 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 CTCFP49711 727 aaPredicted RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 TBL3Q12788 808 aaKnown RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 INPP5AQ14642 412 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 MFSD14BQ5SR56 506 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 CC2D2BQ6DHV5 1058 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 ULK4Q96C45 1275 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 TMEM245Q9H330 911 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 SLC40A1Q9NP59 571 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 KLHL8Q9P2G9 620 aaPredicted RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 SEPT3Q9UH03 358 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 SEPT9Q9UHD8 586 aaPredicted RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 SYNDIG1LA6NDD5 238 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 NSUN2Q08J23 767 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMC2-201ENST00000286398 TFDP1Q14186 410 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 CCDC149Q6ZUS6 474 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 TRPM8Q7Z2W7 1104 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 ZBED8Q8IZ13 594 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 ALG13Q9NP73 1137 aaKnown RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 AGTP01019 485 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 ZSCAN20P17040 1043 aaPredicted RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 CLK1P49759 484 aaKnown RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 ALDH18A1P54886 795 aaKnown RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 ICA1Q05084 483 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 NCAPHQ15003 741 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 FAM47CQ5HY64 1035 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 ZNF589Q86UQ0 364 aaPredicted RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 DDHD1Q8NEL9 900 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 ERP27Q96DN0 273 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 GINS4Q9BRT9 223 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 ZNF577Q9BSK1 485 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 POLD4Q9HCU8 107 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 MAPKBP1O60336 1514 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 XPO1O14980 1071 aaKnown RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 ATP1A1P05023 1023 aaKnown RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 LSP1P33241 339 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 PPARGP37231 505 aaPredicted RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 HADHAP40939 763 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 GPS1Q13098 491 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 PRKG1Q13976 671 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 FRA10AC1Q70Z53 315 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 SGSM3Q96HU1 749 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 KCNK16Q96T55 309 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 PAGR1Q9BTK6 254 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 RANBP17Q9H2T7 1088 aaKnown RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 ATP6V0A4Q9HBG4 840 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 NPC1L1Q9UHC9 1359 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 EFCAB14O75071 495 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 SCP2P22307 547 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 TYK2P29597 1187 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 IRAK1P51617 712 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 CDC37Q16543 378 aaPredicted RBP9.66□□□□□ -0.86
SMC2-201ENST00000286398 OLFML1Q6UWY5 402 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 KIF2BQ8N4N8 673 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 AGR3Q8TD06 166 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 AIFM3Q96NN9 605 aa9.66□□□□□ -0.86
SMC2-201ENST00000286398 SFI1A8K8P3 1242 aa9.65□□□□□ -0.86
SMC2-201ENST00000286398 MARK3P27448 753 aa9.65□□□□□ -0.86
SMC2-201ENST00000286398 COPB2P35606 906 aa9.65□□□□□ -0.86
SMC2-201ENST00000286398 GYG1P46976 350 aa9.65□□□□□ -0.86
SMC2-201ENST00000286398 STAT4Q14765 748 aa9.65□□□□□ -0.86
SMC2-201ENST00000286398 CCDC142Q17RM4 750 aa9.65□□□□□ -0.86
SMC2-201ENST00000286398 MDH1BQ5I0G3 518 aa9.65□□□□□ -0.86
SMC2-201ENST00000286398 GPATCH4Q5T3I0 446 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms