RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 NPEPPSP55786 919 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 NCBP1Q09161 790 aaKnown RBP22.97■■□□□ 1.27
YBX3-202ENST00000279550 TAPT1Q6NXT6 567 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 ABHD15Q6UXT9 468 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 RRAGAQ7L523 313 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 TRMT1LQ7Z2T5 733 aaKnown RBP22.97■■□□□ 1.27
YBX3-202ENST00000279550 APBA2Q99767 749 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 ARHGAP39Q9C0H5 1083 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 RNF186Q9NXI6 227 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 TRIM10Q9UDY6 481 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 PLAGL2Q9UPG8 496 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 URI1O94763 535 aaPredicted RBP22.96■■□□□ 1.27
YBX3-202ENST00000279550 PSAPP07602 524 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 TXNP10599 105 aaKnown RBP22.96■■□□□ 1.27
YBX3-202ENST00000279550 RPL13P26373 211 aaKnown RBP22.96■■□□□ 1.27
YBX3-202ENST00000279550 NFIL3Q16649 462 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 CELF3Q5SZQ8 465 aaKnown RBP22.96■■□□□ 1.27
YBX3-202ENST00000279550 BORCS6Q96GS4 357 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 EDEM3Q9BZQ6 932 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 ABHD16BQ9H3Z7 469 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 ARHGAP20Q9P2F6 1191 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 TFR2Q9UP52 801 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 ZNF862O60290 1169 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 STBD1O95210 358 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 ATG7O95352 703 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 CYP2B6P20813 491 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 ARHGAP29Q52LW3 1261 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 DPY19L2P1Q6NXN4 242 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 MIS18BP1Q6P0N0 1132 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 MLXIPQ9HAP2 919 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 GPRC5CQ9NQ84 441 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 ANKEF1Q9NU02 776 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 FLRT1Q9NZU1 646 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 WDR81Q562E7 1941 aa22.96■■□□□ 1.27
YBX3-202ENST00000279550 RBM47A0AV96 593 aaKnown RBP22.95■■□□□ 1.26
YBX3-202ENST00000279550 K7ENM7 598 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 EPB41P11171 864 aaKnown RBP22.95■■□□□ 1.26
YBX3-202ENST00000279550 SP3Q02447 781 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 XKR9Q5GH70 373 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 GANQ9H2C0 597 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 NLRC4Q9NPP4 1024 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 AGPAT3Q9NRZ7 376 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 DMAC2Q9NW81 257 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 CEP72Q9P209 647 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 GABBR1Q9UBS5 961 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.95■■□□□ 1.26
YBX3-202ENST00000279550 PCDHB13Q9Y5F0 798 aa22.95■■□□□ 1.26
YBX3-202ENST00000279550 V9GYY5 206 aaPredicted RBP22.95■■□□□ 1.26
YBX3-202ENST00000279550 EIF3CLB5ME19 914 aaKnown RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 KIF5CO60282 957 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 AFPP02771 609 aaKnown RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 SUPT20HL2P0C7V6 817 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 CYLC1P35663 651 aaPredicted RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 ACVR2BQ13705 512 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 CCL14Q16627 93 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 ZNF569Q5MCW4 686 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 OLFML2BQ68BL8 750 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 SWSAP1Q6NVH7 229 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 STXBP4Q6ZWJ1 553 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 ANO5Q75V66 913 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 CCDC60Q8IWA6 550 aaPredicted RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 CCDC170Q8IYT3 715 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 ATP6V0A1Q93050 837 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 EIF3CQ99613 913 aaKnown RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 THSD7BQ9C0I4 1608 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 MGAMO43451 1857 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 RCCD1A6NED2 376 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 ZNF263O14978 683 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 PLS3P13797 630 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 EIF4A3P38919 411 aaKnown RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 POLR2FP61218 127 aaKnown RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 DCAF17Q5H9S7 520 aaPredicted RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 TMEM63BQ5T3F8 832 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 DHX37Q8IY37 1157 aaKnown RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 SLC35F6Q8N357 371 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 ANKRD7Q92527 254 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 SLC35C1Q96A29 364 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 ERO1AQ96HE7 468 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 CCDC43Q96MW1 224 aaKnown RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 GBP3Q9H0R5 595 aa22.94■■□□□ 1.26
YBX3-202ENST00000279550 METTL14Q9HCE5 456 aaKnown RBP22.94■■□□□ 1.26
YBX3-202ENST00000279550 ACTN1P12814 892 aa22.93■■□□□ 1.26
YBX3-202ENST00000279550 ADCYAP1R1P41586 468 aa22.93■■□□□ 1.26
YBX3-202ENST00000279550 CYP2J2P51589 502 aa22.93■■□□□ 1.26
YBX3-202ENST00000279550 PPP2R3AQ06190 1150 aa22.93■■□□□ 1.26
YBX3-202ENST00000279550 CACNA2D4Q7Z3S7 1137 aa22.93■■□□□ 1.26
YBX3-202ENST00000279550 FAM186BQ8IYM0 893 aa22.93■■□□□ 1.26
YBX3-202ENST00000279550 COPS5Q92905 334 aa22.93■■□□□ 1.26
YBX3-202ENST00000279550 ZSWIM8A7E2V4 1837 aa22.92■■□□□ 1.26
YBX3-202ENST00000279550 IGKV6D-21A0A0A0MT36 114 aa22.92■■□□□ 1.26
YBX3-202ENST00000279550 GSTTP1A0A1W2PQM5 241 aa22.92■■□□□ 1.26
YBX3-202ENST00000279550 DKC1O60832 514 aaKnown RBP eCLIP22.92■■□□□ 1.26
YBX3-202ENST00000279550 MAPTP10636 758 aaKnown RBP22.92■■□□□ 1.26
YBX3-202ENST00000279550 XRCC5P13010 732 aaKnown RBP22.92■■□□□ 1.26
YBX3-202ENST00000279550 SLC9A1P19634 815 aa22.92■■□□□ 1.26
YBX3-202ENST00000279550 CYP27A1Q02318 531 aa22.92■■□□□ 1.26
YBX3-202ENST00000279550 KIF22Q14807 665 aa22.92■■□□□ 1.26
YBX3-202ENST00000279550 HSDL1Q3SXM5 330 aa22.92■■□□□ 1.26
YBX3-202ENST00000279550 SEPT1Q8WYJ6 367 aa22.92■■□□□ 1.26
YBX3-202ENST00000279550 LARSQ9P2J5 1176 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms