RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 THRAP3Q9Y2W1 955 aaKnown RBP16.75■□□□□ 0.27
UBR3-201ENST00000272793 GPAA1O43292 621 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 GSPT1P15170 499 aaKnown RBP16.75■□□□□ 0.27
UBR3-201ENST00000272793 PFKFB1P16118 471 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 HPCAP84074 193 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 ADCY2Q08462 1091 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 SLFN12Q8IYM2 578 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 TMEM87BQ96K49 555 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 CCDC151A5D8V7 595 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 PPP6R2O75170 966 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 HSPA9P38646 679 aaKnown RBP16.74■□□□□ 0.27
UBR3-201ENST00000272793 KRT40Q6A162 431 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 KIAA0408Q6ZU52 694 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 KRT25Q7Z3Z0 450 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 SNRNP27Q8WVK2 155 aaKnown RBP16.74■□□□□ 0.27
UBR3-201ENST00000272793 DTNBP1Q96EV8 351 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 MCM8Q9UJA3 840 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 STXBP3O00186 592 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 BPIFB4P59827 614 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 ARMCX4Q5H9R4 360 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 UBE2OQ9C0C9 1292 aaKnown RBP16.74■□□□□ 0.27
UBR3-201ENST00000272793 ANKRD2Q9GZV1 360 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 MAN1C1Q9NR34 630 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 KCNA2P16389 499 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 ATXN3P54252 364 aaPredicted RBP16.74■□□□□ 0.27
UBR3-201ENST00000272793 INPP5AQ14642 412 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 SMAD1Q15797 465 aaKnown RBP16.74■□□□□ 0.27
UBR3-201ENST00000272793 ZSWIM7Q19AV6 140 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.74■□□□□ 0.271e-8■■■□□ 17.1
UBR3-201ENST00000272793 CCDC87Q9NVE4 849 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 DDI2Q5TDH0 399 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 ADCK2Q7Z695 626 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 SLC52A1Q9NWF4 448 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 BLOC1S6Q9UL45 172 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 FKBP9O95302 570 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 PSMC3P17980 439 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 COPB2P35606 906 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 ICE2Q659A1 982 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 FKBP9P1Q75LS8 142 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 IMPAD1Q9NX62 359 aa16.74■□□□□ 0.27
UBR3-201ENST00000272793 NXF1Q9UBU9 619 aaKnown RBP16.74■□□□□ 0.27
UBR3-201ENST00000272793 CCDC157Q569K6 752 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 GALNT4Q8N4A0 578 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 FAM162AQ96A26 154 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 ATXN7L3BQ96GX2 97 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 CCDC130P13994 396 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 FASTKD1Q53R41 847 aaKnown RBP16.73■□□□□ 0.27
UBR3-201ENST00000272793 SLC30A9Q6PML9 568 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 ASIC4Q96FT7 647 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 QKIQ96PU8 341 aaKnown RBP eCLIP16.73■□□□□ 0.275e-7■■■■■ 46.4
UBR3-201ENST00000272793 MRPL47Q9HD33 250 aaKnown RBP16.73■□□□□ 0.27
UBR3-201ENST00000272793 COG2Q14746 738 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 PARP10Q53GL7 1025 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 ITPRIPL1Q6GPH6 555 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 CASP10Q92851 521 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 CEP95Q96GE4 821 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 MLXIPLQ9NP71 852 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 TOM1O60784 492 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 AFG1LQ8WV93 481 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 C17orf80Q9BSJ5 609 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 RWDD3Q9Y3V2 267 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 MYBL1P10243 752 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 SOAT1P35610 550 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 CCT3P49368 545 aaKnown RBP16.73■□□□□ 0.27
UBR3-201ENST00000272793 COBLL1Q53SF7 1204 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 HEXIM2Q96MH2 286 aaKnown RBP16.73■□□□□ 0.27
UBR3-201ENST00000272793 AP1M1Q9BXS5 423 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 HEY1Q9Y5J3 304 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 TJP3O95049 919 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 TRIM49P0CI25 452 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 TRIM49CP0CI26 452 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 CASP14P31944 242 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 ADAM9Q13443 819 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 LBHD1Q9BQE6 289 aaPredicted RBP16.73■□□□□ 0.27
UBR3-201ENST00000272793 PDZK1P1A8MUH7 402 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 SNUPNO95149 360 aaKnown RBP16.73■□□□□ 0.27
UBR3-201ENST00000272793 FAM107AO95990 144 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 CLIC6Q96NY7 704 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 MAGEB5Q9BZ81 275 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 HSPBP1Q9NZL4 362 aa16.73■□□□□ 0.27
UBR3-201ENST00000272793 PCP4L1A6NKN8 68 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 ZNF500O60304 480 aaPredicted RBP16.72■□□□□ 0.27
UBR3-201ENST00000272793 GUCY1B2O75343 617 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 FTCDO95954 541 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 H2AFZP0C0S5 128 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 CDC27P30260 824 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 TRAP1Q12931 704 aaKnown RBP16.72■□□□□ 0.27
UBR3-201ENST00000272793 H2AFVQ71UI9 128 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 CALML6Q8TD86 181 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 SMCO3A2RU48 225 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 HNRNPDLO14979 420 aaKnown RBP16.72■□□□□ 0.27
UBR3-201ENST00000272793 ANGPT2O15123 496 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 LPIN1Q14693 890 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 SKIV2LQ15477 1246 aaKnown RBP16.72■□□□□ 0.27
UBR3-201ENST00000272793 PHKG1Q16816 387 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 FAM47AQ5JRC9 791 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 PLOD1Q02809 727 aaPredicted RBP16.72■□□□□ 0.27
UBR3-201ENST00000272793 BBS7Q8IWZ6 715 aa16.72■□□□□ 0.27
UBR3-201ENST00000272793 GLMNQ92990 594 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms