RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 CCDC169A6NNP5 214 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 ASAP2O43150 1006 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 LMNB1P20700 586 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 POLD1P28340 1107 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 IFNAR2P48551 515 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 PSEN1P49768 467 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 GPSM2P81274 684 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 FAM133BQ5BKY9 247 aaKnown RBP20.22■□□□□ 0.83
CNIH3-201ENST00000272133 ETNPPLQ8TBG4 499 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 EPS8L3Q8TE67 593 aaKnown RBP20.22■□□□□ 0.83
CNIH3-201ENST00000272133 TCP11Q8WWU5 503 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 NAP1L4Q99733 375 aaKnown RBP20.22■□□□□ 0.83
CNIH3-201ENST00000272133 RUSC1Q9BVN2 902 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 BHMT2Q9H2M3 363 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 KIF1CO43896 1103 aaKnown RBP20.22■□□□□ 0.83
CNIH3-201ENST00000272133 RAD21O60216 631 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 UFL1O94874 794 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 NBPF9Q3BBW0 867 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 ACCSLQ4AC99 568 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 SLFN12Q8IYM2 578 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 MIEF2Q96C03 454 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 BORCS6Q96GS4 357 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 P2RX7Q99572 595 aaKnown RBP20.22■□□□□ 0.83
CNIH3-201ENST00000272133 GRHL1Q9NZI5 618 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 DNAJC12Q9UKB3 198 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 MYO3BQ8WXR4 1341 aa20.22■□□□□ 0.83
CNIH3-201ENST00000272133 GTPBP10A4D1E9 387 aaKnown RBP20.21■□□□□ 0.83
CNIH3-201ENST00000272133 TGFB1I1O43294 461 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 VIMP08670 466 aaKnown RBP20.21■□□□□ 0.83
CNIH3-201ENST00000272133 RPSAP08865 295 aaKnown RBP20.21■□□□□ 0.83
CNIH3-201ENST00000272133 VCAM1P19320 739 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 FGFR4P22455 802 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 RPA1P27694 616 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 MMP14P50281 582 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 BMT2Q1RMZ1 405 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 CCDC63Q8NA47 563 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 NAP1L3Q99457 506 aaPredicted RBP20.21■□□□□ 0.83
CNIH3-201ENST00000272133 SYT11Q9BT88 431 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 GPR88Q9GZN0 384 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 SAMD15Q9P1V8 674 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 DIS3Q9Y2L1 958 aaKnown RBP20.21■□□□□ 0.83
CNIH3-201ENST00000272133 LY75O60449 1722 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 FAM187AA6NFU0 413 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 PPP1R12BO60237 982 aaPredicted RBP20.21■□□□□ 0.83
CNIH3-201ENST00000272133 CLTAP09496 248 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 SLURP2P0DP57 97 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 DHX34Q14147 1143 aaKnown RBP20.21■□□□□ 0.83
CNIH3-201ENST00000272133 ITIH4Q14624 930 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 QRICH1Q2TAL8 776 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 TBC1D1Q86TI0 1168 aaPredicted RBP20.21■□□□□ 0.83
CNIH3-201ENST00000272133 ATP6V0A4Q9HBG4 840 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 TRPC6Q9Y210 931 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 PCDHA1Q9Y5I3 950 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 GAKO14976 1311 aa20.21■□□□□ 0.83
CNIH3-201ENST00000272133 CYP3A7-CYP3A51PA0A087WV96 503 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 ECM2O94769 699 aaPredicted RBP20.2■□□□□ 0.82
CNIH3-201ENST00000272133 CYP3A7P24462 503 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 HSPA1LP34931 641 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 RPL21P46778 160 aaKnown RBP20.2■□□□□ 0.82
CNIH3-201ENST00000272133 PNMA8AQ86V59 439 aaPredicted RBP20.2■□□□□ 0.82
CNIH3-201ENST00000272133 TEX2Q8IWB9 1127 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 FAM186BQ8IYM0 893 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 KIRREL3Q8IZU9 778 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 STK33Q9BYT3 514 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 CCDC113Q9H0I3 377 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 ABCF3Q9NUQ8 709 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 DAGLAQ9Y4D2 1042 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 ZMYM2Q9UBW7 1377 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 MARCKSL1P49006 195 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 PPP2R5EQ16537 467 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 CCDC38Q502W7 563 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 GPATCH4Q5T3I0 446 aaKnown RBP20.2■□□□□ 0.82
CNIH3-201ENST00000272133 TLDC1Q6P9B6 456 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 TRPM8Q7Z2W7 1104 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 ARHGEF1Q92888 912 aaKnown RBP20.2■□□□□ 0.82
CNIH3-201ENST00000272133 MBOAT7Q96N66 472 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 DDX4Q9NQI0 724 aaKnown RBP20.2■□□□□ 0.82
CNIH3-201ENST00000272133 GGT7Q9UJ14 662 aa20.2■□□□□ 0.82
CNIH3-201ENST00000272133 AFF2P51816 1311 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 MPHOSPH10O00566 681 aaKnown RBP20.19■□□□□ 0.82
CNIH3-201ENST00000272133 TBCAO75347 108 aaKnown RBP20.19■□□□□ 0.82
CNIH3-201ENST00000272133 PTGIRP43119 386 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 ARHGAP4P98171 946 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 COG2Q14746 738 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 CBWD6Q4V339 395 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 CBWD3Q5JTY5 395 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 CBWD5Q5RIA9 395 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 KSR1Q8IVT5 923 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 ZDHHC14Q8IZN3 488 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 ERMNQ8TAM6 284 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 KRT35Q92764 455 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 FAM163AQ96GL9 167 aaPredicted RBP20.19■□□□□ 0.82
CNIH3-201ENST00000272133 AGAP1Q9UPQ3 857 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 RGL2O15211 777 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 SLC26A4O43511 780 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 GSTA1P08263 222 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 ZC2HC1CQ53FD0 456 aaPredicted RBP20.19■□□□□ 0.82
CNIH3-201ENST00000272133 TTC27Q6P3X3 843 aa20.19■□□□□ 0.82
CNIH3-201ENST00000272133 RASAL2Q9UJF2 1139 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms